Agrobacterium tumefaciens S33: AWN88_00360
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Entry
AWN88_00360 CDS
T04213
Name
(GenBank) hypothetical protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
ata
Agrobacterium tumefaciens S33
Pathway
ata02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ata00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AWN88_00360
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ata02000
]
AWN88_00360
Transporters [BR:
ata02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
AWN88_00360
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
TOBE_2
AAA_21
SMC_N
AAA_16
AAA_22
AAA
AAA_23
AAA_29
Mg_chelatase
AAA_28
ORC-CDC6-like
AAA_25
RsgA_GTPase
NB-ARC
NACHT
nSTAND3
Rad17
nSTAND1
AAA_5
ATPase_2
nSTAND_NTPase5
Motif
Other DBs
NCBI-ProteinID:
AMD56778
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All DBs
Position
circular:75800..76849
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AA seq
349 aa
AA seq
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MMTNFSSGPSGVGISGLRCDYGAVATLHSIDLDIRSGEFVSLLGPSGCGKTTLLRCIAGL
NQPTAGEILLGGRPISSLPIHKRNVGMVFQSYALFPHMTVAQNVAFGLKMAKVVKSEADE
RVAEALELVAMQSFAERYPSQLSGGQQQRVALARAIVTRPSVLLLDEPFGALDAKLRTGL
QAELRSLQQRLHVTTIFVTHDQEEAMVMSDRIAVMNSGKIHQFADPMSVYDRPSTTFVAE
FVGQVNVLSQDVPGIDIGASERAIIRPERVFVGSSPTESLVTTIAGTVVDAVFCGDTIRV
TLNTPAGQFVSTQKHNGNAPLSVAGQSVEVWWRKDDIVRFDAAGQATTV
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgatgaccaatttttcctctggcccatcaggcgtcggcatcagcggacttcgttgtgac
tatggcgctgtcgctacactgcactccatcgatctcgacattcggtccggcgagtttgtc
tcactcctcggtccttcgggatgcggcaagacgacgttgcttcgttgcattgcgggcctc
aaccagccaacagctggcgaaatcctgcttggcggtcggccgatatcgtcgctgccgatc
cacaagcgcaacgtcggcatggttttccagagctatgcactattcccgcatatgaccgtc
gcccagaacgtcgcttttggcttgaaaatggcgaaggtagtcaaatctgaagccgacgag
cgcgtggcagaggcgctcgaacttgtggccatgcagtcgtttgccgaacgctatccatcc
cagctctccggtggacagcaacagcgtgtggcgcttgcgcgagcgatcgtgacgcggccg
tccgtcctgctgttagacgagccattcggtgccctcgatgcgaagctgcggaccggcttg
caagctgaattgcggagcctgcagcagaggctgcatgtgacgacaatttttgtcactcac
gatcaggaagaggcgatggtcatgtcagaccgcatcgccgtcatgaacagcggaaaaatt
caccaattcgccgatccgatgagtgtctacgacaggccatccaccacgtttgtcgccgaa
tttgtgggccaggtaaatgttttgtctcaggatgtgccaggcatcgatatcggcgcgagc
gagcgcgccatcatacgccccgagcgggtcttcgtcggcagttcgccaactgaatctctg
gtcacgacgatcgctggcaccgtcgtggacgcggttttttgcggcgatacgatccgcgtc
acgctgaatacgccggcagggcaattcgtttcgacacagaagcacaatggcaatgcgccg
ctttctgtggccggacaatctgtggaggtgtggtggcgcaaagacgatatcgtcaggttc
gatgccgcgggccaggccacgactgtttga
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