Agrobacterium tumefaciens S33: AWN88_00550
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Entry
AWN88_00550 CDS
T04213
Name
(GenBank) IclR family transcriptional regulator
KO
K05818
IclR family transcriptional regulator, mhp operon transcriptional activator
Organism
ata
Agrobacterium tumefaciens S33
Brite
KEGG Orthology (KO) [BR:
ata00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ata03000
]
AWN88_00550
Transcription factors [BR:
ata03000
]
Prokaryotic type
Helix-turn-helix
IclR family
AWN88_00550
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_IclR
IclR_C
MarR_2
TrmB
MarR
GAF
HTH_27
GAF_2
Rrf2
HTH_36
DUF4423
Dimerisation
Motif
Other DBs
NCBI-ProteinID:
AMD56809
LinkDB
All DBs
Position
circular:123413..124207
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AA seq
264 aa
AA seq
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MASYKPVIAALRVLEVLAAVNRLGRRANVAEIHHLTGIDKATVVRMLETLISAGYVLRDR
EQPVYHPTGKTLSLGTGYDRHRIVADIISDDLAAFRQQIGWPSDVALFDHDAMLVVQSSR
QSSEPLHFKRASGFRAPVLATSLGLAYLAFCPVAEREDYLARASADPAAWNDLARNRTLL
ESKLAVIRNQGYATMEESYSRTFYESKFFSLGVPIINGERIFGAMNIIYLRNAITETEAR
ERFLEPAREVAGHMAVKLSGSTAF
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atggcatcttacaaacccgtcatagccgcgttgcgggtgctggaagtgctggccgccgtc
aaccggctcggccgccgggccaatgtcgcggagatccatcatctgacggggatcgacaag
gccacggttgtgcgaatgctcgaaacgctcatttctgctgggtatgtcctgcgcgacagg
gaacaaccggtttaccaccccaccggcaaaaccttgtcgctgggcacgggctatgatcgt
caccgcatcgtcgccgacattatatccgacgacctcgcggcctttcgccagcagatcggc
tggccatcggacgtcgcgcttttcgaccacgacgccatgctggtggtgcaatcatcgcgc
cagagcagcgaaccgcttcatttcaaacgtgcttcggggtttcgcgcacctgttctcgcc
accagcctcggacttgcctacctcgcgttctgcccggtcgccgagcgtgaggactatctg
gcccgcgcctcagctgatcccgccgcatggaacgacctcgcccgcaaccggacgctgctc
gaatcaaaactcgcggtgatccggaaccaaggctatgcgacgatggaggaaagctattcg
cgaaccttctacgaatccaagttcttcagccttggtgtgcccatcattaacggtgagcga
attttcggggctatgaacatcatctacctgcgcaatgcgattacggaaacggaagcccgc
gagcggtttctggaacccgcccgcgaagttgcagggcacatggccgtcaaactcagcggc
agcacggccttctag
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