Agrobacterium tumefaciens S33: AWN88_00920
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Entry
AWN88_00920 CDS
T04213
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ata
Agrobacterium tumefaciens S33
Pathway
ata03420
Nucleotide excision repair
ata03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ata00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AWN88_00920
03430 Mismatch repair
AWN88_00920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ata03400
]
AWN88_00920
Enzymes [BR:
ata01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AWN88_00920
DNA repair and recombination proteins [BR:
ata03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AWN88_00920
MMR (mismatch excision repair)
Other MMR factors
AWN88_00920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
Viral_helicase1
AAA_19
UvrD_C
UvrD_C_2
AAA_30
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AMD56876
LinkDB
All DBs
Position
circular:complement(205163..206335)
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AA seq
390 aa
AA seq
DB search
MIGPNKLVIAAAGSGKTTYLVRQALAAGPKRVLITTYTESNEEEIRRKFFEIHGSVPGNI
TIQTWFSLLIEHGVKPFQGRLFDWNVGGMILVSTRSGLRGKDRQGRPSFWGEGDFRRFYF
DKRDRIYSDKLSKLVVRCNEASEGAVIERLSRIFPHVFVDEIQDLAGHDLDILLALFKSP
ATVVMVGDPRQVTYVTHHEARLKKYKDGRIAEFVQSELPKKVACEIDVTSLVTSHRNSPT
ICELSSKLYPAMVATGSCDCVGCRRGVPEDAGLYIVRRKDLPRYLEAARPAQLRWGSNVR
VMSADLPVLTFGRSKGLGFDRVVIYPTKDMMDWLKDPQHALKSETRAKLYVALTRARHTV
AVVFDLPDGDEIPGFNLYSEGGGAAGSTAP
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgattgggccaaacaagctcgtgattgccgccgctgggtcgggaaagacgacttatctc
gtcaggcaggcattggcagctggcccgaagcgggttttgatcaccacttacaccgagtcc
aacgaagaggagatccgacgtaagttcttcgaaattcacggttcggtgcccggcaatatc
accatccagacgtggttcagcctgctgatcgagcacggtgtcaaaccgtttcagggtcga
ttattcgattggaatgtcggcggtatgatcctcgtttcgacgcgatccggtcttcgaggc
aaggaccgccagggccggccgagcttttggggcgaaggtgacttcaggcgcttctatttc
gacaaacgcgatcgtatctattccgacaagctgtcgaaacttgtcgtccggtgcaacgaa
gcatcggaaggtgcagtcatcgagcgcctttcacggattttccctcatgtcttcgttgat
gaaatccaggatcttgccggccatgacctggatatcctgttggctcttttcaaaagcccg
gccacggtcgtcatggtgggagacccgcgccaggtcacctatgtcacccatcatgaggcg
cgccttaagaaatataaagacgggaggattgccgagttcgtccaatcagaattgcccaag
aaggtcgcgtgcgaaatagacgtgaccagcttggtgacgtcgcaccgtaatagtcctacg
atctgtgaattatcttcaaagctctatccggcgatggtcgctaccggttcctgcgactgt
gttggctgccgtcgaggggttccggaagacgccgggctttacatcgtccgccgcaaagat
ttgccccgctatctcgaagcggcccgcccagcacaacttcggtggggttcgaacgttcgg
gtcatgtctgccgatttgcccgttcttacctttggcagatcgaaaggcctcggcttcgac
cgggttgtcatctatcccacaaaagacatgatggactggctgaaggatccgcaacacgca
ctgaaatccgaaacccgcgcgaagttatatgtcgcccttacccgcgctcgacacacggtc
gcggtcgtattcgacctcccagacggcgacgaaatcccgggtttcaatctctatagcgag
ggcggcggggcagcaggttcgactgcgccttga
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