Agrobacterium tumefaciens S33: AWN88_02240
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Entry
AWN88_02240 CDS
T04213
Name
(GenBank) peptide ABC transporter
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
ata
Agrobacterium tumefaciens S33
Pathway
ata02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ata00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AWN88_02240
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ata02000
]
AWN88_02240
Transporters [BR:
ata02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
AWN88_02240
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
AMD57096
LinkDB
All DBs
Position
circular:complement(481997..483562)
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AA seq
521 aa
AA seq
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MSRIRSFVLAAMAAAAIAVPASAETLRWGGRADLYSLDPYSVPSTSNLAFLNHIYEGLVR
YGPDFQIEPALATEWKLIDGKTWRFTLRKGVKFHDGADFTADDVVASFTRASDATSPLRG
NIPIYAGVKKVDDYTVDLDVNAPTSLFLNDITNIFIFNAKWLKDNNSEKPTDFASKVDGY
TTMHTNGTGPFKLESRVPDSKTVLVANEGWWDQKKHNLDRIEFVPIASAATRVAALLSGE
IDLIDSAPIQDLPRLESSPNITVKKRTELRTLFIGFNRREKLENGQPNPFNDLRVRQAFE
ASIDRDLINKKVMRGLARPSGSLIAPEIAGYAKSLDTFEPADPAKAQKLLADAGMKNLAF
TYTCMNDESVNEEDICSGVANMLKRGGFQPTIDIAPRSVQSPKRNGGKADVFNLSWANEP
TLDAFSMLSQILSTRKGAMGVSNYGGWSNPEIDKLVAQAAQEQDNTKRLALEEAALKIAK
DETMLVPLHQQPIAWAMLAKVKSVDFRADNKPRHWLTQLDK
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgtatcagaagttttgtcctagcggccatggctgctgccgccattgccgttccc
gccagcgcggagacccttcgctggggtggtcgcgccgatctctattcgctcgatccctat
tcggttccgtccacatccaacctcgcttttctcaatcatatctacgagggtctcgtccgc
tacggaccggacttccagatcgagccggcactcgccaccgagtggaagctgattgatgga
aagacctggcgctttacccttcgcaagggcgtgaaatttcatgacggtgcagacttcacc
gccgatgatgtcgtcgcatccttcacgcgcgcgtcggacgcgacgtcgccgctgcggggc
aatatcccgatttacgctggcgtcaaaaaagttgacgactacacggtggacctcgatgtc
aacgcgccgacttctctctttctgaacgacataaccaatatcttcatttttaacgccaag
tggttgaaagataacaatagcgagaagcctaccgacttcgcgtcgaaggtcgatggctac
accaccatgcacaccaatggcacaggcccgttcaagctcgaaagccgcgttcccgacagc
aagactgttctcgttgccaatgaaggctggtgggaccagaagaagcacaatctcgaccgc
atcgaattcgtgccgatcgcatctgcggcaacacgcgtcgcggcactgctgtcaggtgaa
atcgacctgatcgactccgccccgatccaggatttgccgcgtctggaatcctcgcccaat
atcacggtcaagaagcgcaccgagcttcgcacgcttttcattggcttcaaccgccgcgaa
aaactggaaaacggccagccgaacccctttaatgatctgcgcgttcgtcaggccttcgaa
gcctccatcgatcgtgacctgatcaacaaaaaagtcatgcgtggtcttgcaagaccgtcc
ggctcgctgatcgcacctgagatcgctggttatgccaaatcgctggacacgttcgagccg
gccgatccggccaaggcgcagaagctgcttgccgatgcgggcatgaagaaccttgccttc
acctatacctgcatgaatgacgagagcgtcaacgaagaggatatctgctcgggcgttgcc
aacatgttgaagcgcggcggtttccagccgaccatcgatattgcgccacgttccgtgcag
tcacccaagcgcaatggcggcaaggctgacgtctttaacctcagctgggcaaacgagccg
actcttgacgccttctcgatgctgtcgcagatcctctcgacccgtaagggcgcgatgggc
gtctccaactatggcggctggtccaatcccgagatcgacaagctcgttgcgcaggcggcg
caggagcaggacaatacgaagcgtctggcgctcgaagaagctgccctgaaaatcgccaag
gacgagaccatgctcgttcccctgcatcagcagccgattgcgtgggctatgctggccaag
gtcaaaagcgtcgacttccgcgctgacaacaagccacgccattggctgacccagctcgac
aaataa
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