Agrobacterium tumefaciens S33: AWN88_02585
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Entry
AWN88_02585 CDS
T04213
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
ata
Agrobacterium tumefaciens S33
Pathway
ata03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ata00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
AWN88_02585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ata03400
]
AWN88_02585
DNA repair and recombination proteins [BR:
ata03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
AWN88_02585
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ku
HTH_SUN2
TumE
Motif
Other DBs
NCBI-ProteinID:
AMD57157
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All DBs
Position
circular:566937..567728
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AA seq
263 aa
AA seq
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MARQVFWKGYLKLSLVTASVSLTPATTEGNKYRFHVLNRKTGNRVESRYVDSVTHRPVAA
KNQVKGFPRGEDDYVLLEDDEIDAVALESTRTIDIKTFVPKGSIDWIWYDRPHFLRPEDK
IGAEAFSVIREAMTANGVFGIARLVLYRRERAVLLEPSGKGIILWTLHYGEEVRESIDAL
DPKMKLEKPLLQAMEKRISSQMTEWKPTLVQDPIQKKIRSLLKSKGNEAPASNKKAGTKA
RTGGNVINIMDALKKSIAAEKKR
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atggcacgtcaggttttctggaagggttatctgaagctgtcgctggtgacggcctccgtg
tcgctgacacctgcaacgacagaaggcaacaagtaccgcttccacgttctcaatcgcaag
accggcaatcgcgtcgaaagccgttatgtcgacagcgtcacccaccgccccgttgcggcg
aaaaaccaggtgaagggttttccccgtggcgaggacgattatgtgctgctcgaggatgac
gagatcgatgcggtggcgctcgaaagtacgcgcacgatcgatatcaagacctttgtgcca
aaaggctccatagactggatctggtacgaccgaccgcactttcttcgcccggaagacaag
atcggcgccgaagccttcagcgtcattcgcgaggccatgacggcaaacggcgttttcggc
attgcccggcttgtgctctaccggcgggaacgggccgtgctgctggaaccttccggcaag
ggtatcatcctgtggacattgcactacggcgaggaggtgcgcgaaagcattgacgctctc
gatccgaagatgaaacttgaaaagccgctgctgcaggccatggaaaaacgcatttccagc
cagatgacggagtggaaaccaacgttggttcaggacccgatccagaaaaagatcaggtcg
ctgctcaagagcaaaggcaatgaggcgcccgcctcgaacaagaaggccggcaccaaggcc
cgaaccggcggcaacgtcatcaacatcatggacgccttgaagaaaagcatcgcggccgaa
aagaagcgctga
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