Agrobacterium tumefaciens S33: AWN88_05325
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Entry
AWN88_05325 CDS
T04213
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
ata
Agrobacterium tumefaciens S33
Pathway
ata03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
ata00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
AWN88_05325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
ata03011
]
AWN88_05325
Ribosome [BR:
ata03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
AWN88_05325
Bacteria
AWN88_05325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
OB_RRP5
OB_RRP5_4th
CvfB_2nd
DUF5446
Motif
Other DBs
NCBI-ProteinID:
AMD57653
UniProt:
A0A0X8IW16
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Position
circular:complement(1183792..1185492)
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AA seq
566 aa
AA seq
DB search
MSVSTPTREDFAALLEESFASNDLAEGYVAKGIVTAIEKDVAIVDVGLKVEGRVPLKEFG
AKSKDGTLKVGDEVEVYVERIENALGEAVLSREKARREESWVKLEAKFEAGERVEGVIFN
QVKGGFTVDLDGAVAFLPRSQVDIRPIRDVTPLMHNPQPFEILKMDKRRGNIVVSRRTVL
EESRAEQRSEIVQNLEEGQVVDGVVKNITDYGAFVDLGGIDGLLHVTDMAWRRVNHPSEI
LNIGQQVKVQIIRINQETHRISLGMKQLESDPWDGISAKYPVGKKISGTVTNITDYGAFV
ELEPGIEGLIHISEMSWTKKNVHPGKILSTSQEVDVVVLEVDPSKRRISLGLKQTLENPW
QAFAYSHPAGTEVEGEVKNKTEFGLFIGLEGDVDGMVHLSDLDWNRPGEQVIEEYNKGDV
VKAVVLDVDVEKERISLGIKQLGKDAVGEAASSGDLRKNAVVSAEVTAVNDGGIEVKLVN
HEDLTSFIRRADLSRDRDEQRPERFSVGQVVDARVVNFSKKDRKVMLSIKALEIAEEKEA
VAQFGSSDSGASLGDILGAALKNRGE
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtatctacccccacgcgcgaagatttcgcagcgcttctcgaagaatcctttgcc
tccaacgatcttgccgaaggctatgttgccaagggtatcgtaacggcaatcgagaaggac
gttgccatcgtcgacgtcggcctcaaggttgaaggccgcgtaccgttgaaggaattcggc
gcgaagtccaaggacggcacgctgaaggtcggcgacgaagtcgaagtttacgtcgagcgc
attgaaaacgctctcggcgaagccgttctgtcgcgcgagaaggctcgccgcgaagaaagc
tgggtcaagctcgaagccaagttcgaagctggcgagcgcgtcgaaggcgtcatcttcaac
caggtcaagggtggtttcaccgtcgatctggatggcgctgttgcgttcctgccgcgttct
caggtcgacattcgtccgatccgcgacgttaccccgctgatgcacaacccgcagcccttc
gaaatcctcaagatggacaagcgtcgcggcaacatcgttgtttcgcgtcgtacggttctc
gaagagtcgcgtgccgagcagcgttctgaaatcgttcagaacctcgaagaaggccaggtt
gttgacggcgtcgtcaagaacatcaccgattacggtgcgttcgttgacctcggcggcatc
gacggtctgctgcacgtcaccgatatggcatggcgccgcgtcaaccatccttcggaaatc
ctcaacattggccagcaggtcaaggttcagatcatccgcatcaaccaggaaacccaccgt
atctcgctcggcatgaagcagctcgagtcggatccgtgggatggcatctccgccaagtac
ccggttggtaagaagatctccggtacggtcacgaacatcaccgactacggtgcattcgtt
gaactggagccgggcatcgaaggcctgatccacatttccgaaatgtcctggaccaagaag
aacgtacaccccggcaagatcctgtccacgagccaggaagttgacgttgtcgttctcgaa
gtcgatccgtccaagcgccgtatctcgctcggtctcaagcagacgcttgaaaacccgtgg
caggcattcgcttacagccatccggctggcacggaagtcgaaggcgaagtcaagaacaag
accgaattcggcctgttcattggcctcgaaggcgatgtcgacggcatggttcacctgtcg
gacctcgactggaaccgtccgggcgagcaggtcatcgaagagtacaacaagggtgacgtc
gttaaggctgtcgttctcgacgttgacgttgagaaggaacgcatctcgctcggcatcaag
cagctcggcaaggacgctgtcggcgaagccgcttcttccggcgacctgcgcaagaacgca
gtcgtttccgctgaagtcaccgcggtcaacgatggcggtatcgaagtgaagctcgtcaac
cacgaagacctcacctcgttcatccgtcgcgctgatctttcccgtgaccgtgacgagcag
cgccctgagcgcttctccgttggccaggttgtcgacgcccgcgtcgtcaacttctcgaag
aaggaccgcaaggtcatgctttcgatcaaggctctggaaatcgctgaagagaaggaagcc
gtcgcacagttcggttcgtccgactcgggcgcttcgctcggcgacatcctcggcgcggct
ctgaagaaccgcggcgaataa
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