Agrobacterium tumefaciens S33: AWN88_09800
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Entry
AWN88_09800 CDS
T04213
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
ata
Agrobacterium tumefaciens S33
Pathway
ata02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ata00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AWN88_09800
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ata02000
]
AWN88_09800
Transporters [BR:
ata02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
AWN88_09800
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA
AAA_22
SMC_N
Rad17
Mg_chelatase
AAA_19
SRP54
nSTAND1
TOBE_2
AAA_30
AAA_25
AAA_29
MCPVI
AAA_14
AAA_27
AAA_16
AAA_5
PRK
RsgA_GTPase
AAA_28
AAA_23
TsaE
nSTAND_NTPase5
ORC-CDC6-like
Motif
Other DBs
NCBI-ProteinID:
AMD58444
LinkDB
All DBs
Position
circular:2189119..2190144
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AA seq
341 aa
AA seq
DB search
MSDANYLSLQKISLAYGGNVAVKDLDLDIRKGELLALLGPSGCGKTTTMRAIAGLMPVAA
GRINLDGADITRVAANKRAVGLVFQSYALFPHLTVYENVAFGLKLKGMSGKALEDKVASG
LKSVGLSNFASRKPAELSGGQQQRVALARSMVMEPKVLLLDEPLSNLDARLRLEMRTELQ
RVQKETGVTMIFVTHDQIEALALADRIVVMKGGKIEQIGTPEEIYNAPVSAFVADFVGFE
NIFALQGGALKTANGTTPLPGPVLSASGLAWRPRMVTLGSGPFQGTVRGTSFAGNSREYL
LDTPLGPIKAETDAALTSHAIGDTLAFDLPVEKAASLKVFN
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacgcaaattatctttcgctgcaaaaaatctcgctcgcctatggcggcaatgtc
gccgtcaaggatctcgatctcgatatccgcaagggcgaattgctcgcgcttctcgggccc
tccggctgcggcaagaccacgacgatgcgcgccatcgccgggctgatgccggtggctgcc
gggcggatcaatctcgatggcgccgatattacccgcgttgcggccaacaaacgcgccgtc
gggctggtgttccagtcctatgcgctcttcccgcatctgacggtctatgaaaacgtcgcc
ttcggcctgaaactcaagggaatgagcggcaaggcgctggaggacaaggtcgcctccggc
ctgaagtcggtcggcctgtccaatttcgcctcacgcaagccggcggaactatcgggcggc
cagcagcaacgcgtggcattggcacgctccatggtcatggagccgaaagtgctgcttctc
gacgagccgctctccaatctcgacgcccgcctgcgtcttgaaatgcggaccgaactgcag
cgcgtgcagaaggagacgggtgtcacgatgatcttcgtcacccatgaccagatcgaggcg
ctggcgcttgccgaccgcattgtcgtcatgaagggcggcaagattgagcagatcggcacg
ccggaagagatttacaacgcgccggtttccgccttcgtggccgacttcgtcggcttcgaa
aacatcttcgcccttcaaggcggggctttgaaaaccgccaacggcacaacaccgcttccc
ggaccagtcctttcagcatccggactggcctggcggccgcgcatggtcaccctcggttca
ggtcctttccagggaaccgtgcgcggcacatccttcgccggcaacagccgcgaatatctg
ctcgacacaccgctcgggcccatcaaggctgaaaccgacgcggccctgacctcccacgca
atcggcgatacgcttgccttcgacctgccggtcgaaaaggcggcgagcctcaaggtattc
aactga
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