Agrobacterium tumefaciens S33: AWN88_09905
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Entry
AWN88_09905 CDS
T04213
Name
(GenBank) peptide ABC transporter
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
ata
Agrobacterium tumefaciens S33
Pathway
ata02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ata00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AWN88_09905
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ata02000
]
AWN88_09905
Transporters [BR:
ata02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
AWN88_09905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
AMD58464
LinkDB
All DBs
Position
circular:complement(2212026..2213735)
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AA seq
569 aa
AA seq
DB search
MKKRSVLFAGTVAAMALAGSAAHAERGSDGELKILFWQAVSTLNPYLSGGTKEVYSSSMV
IEPLARYDEKGELVPMLVTEIPTIDNGGVAKDLLSMTWKLKTDVKWSDGTPFTAEDVIFT
WKYCTAPDGGCAQAAQYEGVKNVEAIDAHTVKVSFTEPKPYPYSAFVGAQSPVIQKKQFE
KCVGAAAPGCTSANFGPIGTGPFVVKDFKPNDVISFVANPNYRDPAKPAFATATLKGGGD
AASAARAVLETGEFDYAWNMQVEPEILATMVAAGKGKLETAFGTQVERINLNWYNADPSL
GDKRSTKQAGPHPAISDPAVRRALSLAIDREVIDEAGYGEAGKPTCNIVPAPEAVASTKN
DSWCLKQDVEGANKLLDDAGWVKGADGIRAKNGVKLSFLYQTSTNSVRQATQELVKDMWS
QIGVASELRNVSASVFFGGDPASPDTFQKFYADVEMYTNNFDGTDPEKYLAEWLCDKIPA
PENGWQGQNIPRYCNPEFDKLVGELSKTADLAKRAEISKQLNDMLTEEGAHIPLIHRGSV
SSHSLTLEGVRMNAWDSELWNVADWSRKK
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagcgcagcgttctctttgccggcacggtggcggccatggctctcgcgggctct
gccgcccacgccgagcgcggcagtgacggcgaactgaaaatcctgttctggcaggccgta
tcgacgcttaatccctatctttcgggtggcacgaaggaagtctacagctcgtccatggtt
atcgagccgctggcgcggtatgacgaaaagggcgagctggtgccgatgctggtgaccgag
attccgacgatcgacaatggcggcgtcgcgaaggatcttctcagcatgacgtggaagctg
aagaccgacgtgaagtggtctgacggcacgcccttcaccgcagaggatgtgatcttcacc
tggaaatattgcaccgcacccgatggcggctgcgcgcaggcggcacaatatgagggcgtg
aagaacgtcgaggccatcgacgcacacaccgtcaaggtcagcttcacggagccgaaaccc
tacccctattcggcattcgtgggcgcacagtcgccggtcatccagaagaagcaatttgaa
aaatgcgtcggcgcggcagctcccggctgcacctccgccaatttcggccccatcggcacc
ggccccttcgtcgtcaaggatttcaagccgaacgacgtcatcagcttcgttgccaacccc
aattatcgtgaccccgcgaagcccgccttcgccacggcgaccctgaagggcggcggcgat
gccgcttccgccgcgcgcgccgtgctggaaaccggggaattcgactatgcctggaacatg
caggtggagccggaaatcctcgccaccatggtggcggccggcaagggcaagctggaaacc
gccttcggcacgcaggtcgagcgtatcaatctcaactggtacaacgccgatccttcgctg
ggcgacaagcgctccaccaaacaggccggtccccatccggccatttccgatcccgccgtg
cgtcgcgcgctttcgctcgccatcgaccgtgaggtcatcgatgaagcaggttacggagaa
gcgggcaagccgacctgcaacatcgtaccggctccggaagccgtcgcttccaccaagaat
gacagctggtgcctgaagcaggatgtggaaggcgcaaacaagctattggacgatgccggc
tgggtgaagggtgccgatggcattcgcgccaagaatggcgtgaaactttccttcctttac
cagacgtccaccaactcggttcgccaggccacgcaggaactggtgaaggacatgtggtcg
cagatcggcgtcgcttccgaactgcgcaatgtcagcgcctcggtcttcttcggcggtgac
ccggcgagcccggataccttccagaaattttatgccgacgtcgaaatgtacaccaacaat
ttcgacggtacggacccggaaaaatatctggcggaatggctgtgcgacaagattccggcc
cctgaaaacggctggcaggggcagaatattccgcgttactgcaacccggaattcgacaag
cttgtgggtgaactctccaagaccgccgaccttgccaagcgtgcggagatttccaagcag
ctcaacgacatgctgacggaggaaggcgcgcatattccgctcattcaccgcggcagcgtt
tcctcgcattcgctgacgctggaaggcgtgcgcatgaatgcctgggactcggaactctgg
aacgtcgcggactggtcccgcaagaagtaa
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