Agrobacterium tumefaciens S33: AWN88_10880
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Entry
AWN88_10880 CDS
T04213
Name
(GenBank) LacI family transcriptional regulator
KO
K05499
LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
Organism
ata
Agrobacterium tumefaciens S33
Brite
KEGG Orthology (KO) [BR:
ata00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ata03000
]
AWN88_10880
Transcription factors [BR:
ata03000
]
Prokaryotic type
Helix-turn-helix
LacI family
AWN88_10880
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_31
HTH_3
HTH_Crp_2
HTH_IclR
MarR
HTH_38
HTH_24
Motif
Other DBs
NCBI-ProteinID:
AMD58646
LinkDB
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Position
circular:complement(2422242..2423306)
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AA seq
354 aa
AA seq
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MNDTPDISRPRQSDIAQRAGVSISTVSRVLAGEKGISASIQTKVLGVAAELGYPLRPATN
QAAGVPLEGKTILALMSAERATGDIGAFYHDIFDVLRSLAQTDGFELDIRLLHQKQIDDS
LIQRVCEVDGLLAIGLDPEEEIIHRITQGVLQPVLVNSADPSMMLDCVSPSNFYGGALAA
RRLLELGHRKVAYIGPHHRHTIRERMRGFRHTILEEKGTTYEEFLLSTADSGFGQAGDAV
RQLLAKNPELTGIFCMNDAIALGALGAAQELGLGVPDDLSIIGFDDLPFAELSTPRLSTI
RVDRREIAREAVDLLRRRLTEPSANARQVQLGVQLVEGQTAGKAKKTGKATRDA
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgaacgatacgcccgacatcagccgtccgcgccagtcggatatcgcccagcgcgccggg
gtctccatcagcacagtctcgcgtgttctcgcaggggaaaaagggatcagcgcgtcgatc
cagaccaaggttctgggagttgcggcggagctcggctaccccttgcgaccggcaaccaat
caggcggccggtgtgccgctggaaggcaagacaatcctcgcgctcatgtccgcggaaagg
gcgacgggcgatattggcgcgttttaccacgatattttcgatgtgctgcgcagcctcgcc
cagacggacggtttcgaactcgacatcaggctattgcaccagaagcagatcgacgattcc
ctgatccagcgggtctgtgaggtggacggcctcctggccatcgggctcgatcccgaggag
gagatcatccaccgcatcacgcagggcgtactgcaacctgttcttgtcaacagtgctgac
ccctccatgatgctcgattgcgtttcgccttccaatttttacggcggcgcgctggcggcc
cggcggcttctggaactcggccatcgcaaggtcgcctatatcggtccgcatcatcgccac
accatcagggagcgtatgcgcggcttccgccatacgatccttgaggaaaaaggaacgacc
tatgaggagttcctgctttcgacggcagatagcggcttcgggcaggcgggcgacgcggtt
cgccagctgctggccaaaaaccctgaactgacaggcatcttctgtatgaatgacgcaatt
gcccttggcgcactcggggcagcgcaggagctgggcctcggcgttcccgacgatctttcc
atcatcggtttcgatgacctgccctttgccgaactttctaccccacgtctcagcacgatc
cgggtcgatcgccgcgagattgcgcgcgaagcggttgacctgctgcggcggcgcctgacc
gagccttccgccaatgcccgtcaggtgcaacttggcgtgcagctggtggaaggacagaca
gccggcaaggcgaaaaagacgggaaaggcgacacgcgatgcatga
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