Agrobacterium tumefaciens S33: AWN88_11020
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Entry
AWN88_11020 CDS
T04213
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
ata
Agrobacterium tumefaciens S33
Pathway
ata02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ata00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AWN88_11020
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ata02000
]
AWN88_11020
Transporters [BR:
ata02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
AWN88_11020
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
TAT_signal
Motif
Other DBs
NCBI-ProteinID:
AMD58674
LinkDB
All DBs
Position
circular:2451943..2453232
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AA seq
429 aa
AA seq
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MTDTTSSKKGLSRRGLLKAGAAATGAAIGSGLITGFPTIWAQNPITIRQFGTGVSNLNAI
AEKCKADLGITLEMTATDSDAAAQRAVTQPNSYDIADIEYWILKKVYPAGVIQPMEIKKL
KYYDKIVPLFKNGKLKPDSVVAQGTAPHTVGYVEKPGDKTFAKGETDYFTMVPTIYNADT
LGIRPDLVGRDITSWADIMDPKFKGKTSILNIPSIGIMDAAMIMEAMGNIKYADKGNMTK
AEIDKTIDFLIKAKKDGQFRAFWKSFDESVNLMASGEVIIQSMWSPAVAAVRSKGIACKY
QPLKEGYRSWGGGLGLAKHLSGAKLDAAYEYINWYTSGWVGAYLNRQGYYSAAMETAKEH
MTADEWGYWVEGKAAQGDIIAPDGKVMEKAGAVRDGGSFEERMGKVACWNSVMDEDRYMV
RRWNEFIAA
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgaccgataccaccagcagcaagaagggcctgtcccgccgtggcctcctgaaagcgggc
gcggctgccacgggtgcggcgatcggctccggcctcatcaccggcttcccgaccatctgg
gcgcagaaccccatcaccatccgccagttcggcactggcgtctccaacctcaacgccatt
gccgaaaagtgcaaggcggacctcggcatcacgcttgagatgacggcgacggattccgac
gccgctgcccagcgcgccgtcacccagccgaactcctacgatatcgccgatatcgaatac
tggatcctgaagaaggtctatccggccggcgttatccagccgatggaaatcaagaagctc
aaatattacgacaagatcgtgccgctgttcaaaaacggcaagctgaagcctgacagcgtg
gtcgcgcagggcactgcgccgcacacggtcggttacgtcgagaagcccggcgacaagaca
tttgccaagggtgagaccgattatttcaccatggttccgaccatctacaatgccgatacg
ctcggcatccgccccgatctcgtcggccgcgatatcaccagctgggccgatatcatggac
cccaagttcaagggcaagacctccatcctcaacatcccgtccatcggcatcatggacgcg
gcgatgatcatggaagccatgggcaacatcaaatatgccgacaagggcaacatgacgaag
gcggaaatcgacaagaccatcgatttcctcatcaaggccaagaaggacggccagttccgc
gccttctggaagagcttcgacgaaagcgtcaacctcatggcctcgggcgaagtcatcatc
cagtccatgtggtcaccggccgttgccgcggtccgctcgaagggcatcgcctgtaaatac
cagccgctgaaggaaggctatcgctcctggggcggcggtctcggtctcgccaagcatctg
tccggtgcgaagctcgatgcagcctatgaatatatcaactggtacacctcgggctgggtc
ggcgcctacctcaaccgtcagggttattactccgccgccatggaaaccgcgaaggagcac
atgaccgccgacgagtggggttactgggtcgagggcaaggcggctcagggcgatatcatc
gcgccagacggcaaggtcatggaaaaggccggtgccgtgcgcgatggcggttccttcgag
gagcgcatgggcaaggtggcgtgctggaactctgtcatggacgaagaccgctacatggtc
cgccgctggaacgaattcatcgcggcgtga
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