Agrobacterium tumefaciens S33: AWN88_11410
Help
Entry
AWN88_11410 CDS
T04213
Symbol
cpdB
Name
(GenBank) 2',3'-cyclic-nucleotide 2'-phosphodiesterase
KO
K01119
2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:
3.1.4.16
3.1.3.6
]
Organism
ata
Agrobacterium tumefaciens S33
Pathway
ata00230
Purine metabolism
ata00240
Pyrimidine metabolism
ata01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ata00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
AWN88_11410 (cpdB)
00240 Pyrimidine metabolism
AWN88_11410 (cpdB)
Enzymes [BR:
ata01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.6 3'-nucleotidase
AWN88_11410 (cpdB)
3.1.4 Phosphoric-diester hydrolases
3.1.4.16 2',3'-cyclic-nucleotide 2'-phosphodiesterase
AWN88_11410 (cpdB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
5_nucleotid_C
Metallophos
PGA_cap
GH101_N
Motif
Other DBs
NCBI-ProteinID:
AMD58928
LinkDB
All DBs
Position
linear:complement(34446..36434)
Genome browser
AA seq
662 aa
AA seq
DB search
MSSLLALHPITRRSLLGGIAATSALVMLHPFAARAAANQAHLRIMETTDIHVHVFPYDYY
ADKPNDTMGLARTASIIDTIRAEAGNSMLVDNGDFLQGNPLGDYIAYELGMKAGDKHPVI
NAMNVLGYDCGTLGNHEFNYGLDYMSNTLAGAGFPYVCANLTKGQLASDPKNDELFFKPY
VILEKQIRDGGGVTSPVKVGIIGFVPPQIMMWDSKNLEGKAQTRDIVEAAKAWVPVMKEE
GADIIIALSHSGIDGKGQTERMENASLYLAAVEGIDAIFTGHQHLVFPGPKTWDGIEGAD
AVKGTLMGKPAVMAGFWGSHMGLIDLLLEKDGKSWKIVDFTSEARPIYHRDDSRKVVADY
TDKPEVLAAAKVDHEAALAYVRRPVGKTSAPLYSYFALVADDPSVQIVSNAQTWYIKDML
KEGQYKDLPVLSAAAPFKSGGRGGADYYTDVPAGDIAIKNVADLYLYPNTVQAVLINGAQ
VKNWLEMSAGMFNTVEAGAKDAPLLNPDFPSYNFDVIDGVTYQIDISKPAKFDKDGKAVN
PDSNRIVNLQFNGKPIDPEQKFVVATNNYRASGGGKFPDIAGDKVIFVAPDTNRDVIVRY
IIDQGTINPSADANWSFAPVENTTAVFETGPKGRHYAADIKGARIEDAGDGAEGFAKFRL
IL
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgcttctcgccctacaccccattacccggcgctcgcttctgggtggcattgca
gccacttcggcgctggtgatgttgcacccttttgctgcgcgtgcggcggccaaccaggcg
catctgcgcatcatggaaacgaccgacatccatgttcacgtctttccctatgattattac
gccgacaagccgaacgacacgatgggtctggcgcgcaccgcctcgatcatagacaccatc
cgcgccgaagccgggaactcgatgctggtggataacggtgacttcctgcagggcaacccg
ctcggcgactatatcgcctatgagctcggcatgaaggccggcgacaagcaccctgtcatc
aatgccatgaacgtgttgggttacgattgcggcacgctcggcaaccatgaattcaactat
ggcctcgactatatgtcgaacacgcttgcgggcgccggtttcccctatgtctgcgccaac
ctcaccaaggggcagctggcttccgatccgaagaacgatgagctgttcttcaagccctat
gtcattctggagaaacagatccgcgatggcggcggcgtcaccagcccggtcaaggtcggc
atcatcggtttcgtgccgcctcagatcatgatgtgggactccaagaatctcgagggcaag
gcgcagacgcgtgacatcgtcgaggcggcgaaagcctgggtgcctgtcatgaaggaggaa
ggcgcggatatcatcatcgccctttcccattccggcattgacggcaagggccagaccgag
cgcatggaaaacgcatcgctatatctcgcagctgttgaaggcattgatgcgatcttcacc
ggccaccagcaccttgttttccccggtccgaagacctgggacggcatcgagggtgctgat
gcggtcaagggtacgctgatgggcaagccggcggtcatggccggcttctggggctcccat
atgggccttatcgacctgctgcttgaaaaggatggcaagagctggaagatcgtcgatttc
acctctgaggcccggccaatctaccaccgcgacgacagccgcaaggtcgttgctgactat
accgacaagccggaggttctcgccgcagccaaggtggatcatgaagcggcccttgcctat
gtgcgccgcccggtcggcaagacatccgcgccgctctattcctatttcgcgctggtggca
gacgatccgtccgtgcagatcgtctccaacgcccagacctggtacatcaaggacatgctg
aaggaagggcagtataaggatctgcccgtgctttcggcagcggcaccgttcaaatcgggc
ggtcgtggcggcgcggattattacaccgatgtccccgccggtgacatcgccatcaagaac
gtcgccgatctctatctttatcccaacacggtgcaggcagtgctgatcaacggggcgcag
gtgaagaactggctggaaatgtccgccggcatgttcaatacggttgaggccggtgccaag
gatgcgccactgctcaacccagacttcccgtcctataatttcgacgtgatcgatggcgtg
acttatcagatcgacatttccaaaccggcgaaatttgacaaggacggcaaggcggtcaac
ccggacagcaaccgcatcgtcaacctgcagttcaatggcaagccgatcgatcccgaacag
aaattcgtggttgccaccaataattaccgtgcaagcggcggcggcaaattccccgatatc
gccggcgacaaggtgatcttcgtcgcgcccgatacaaaccgcgacgtgatcgtgcgctat
atcatcgatcagggcaccatcaacccgtccgcggatgccaactggtcctttgcaccggtg
gaaaacaccaccgccgtcttcgagaccgggcccaagggacgccattacgcagccgacatc
aagggcgccaggatcgaggatgccggcgacggcgcggaaggtttcgcgaagttccgcctg
attctttaa
DBGET
integrated database retrieval system
