Agrobacterium tumefaciens S33: AWN88_11650
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Entry
AWN88_11650 CDS
T04213
Name
(GenBank) DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
ata
Agrobacterium tumefaciens S33
Brite
KEGG Orthology (KO) [BR:
ata00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ata03032
]
AWN88_11650
03036 Chromosome and associated proteins [BR:
ata03036
]
AWN88_11650
03400 DNA repair and recombination proteins [BR:
ata03400
]
AWN88_11650
DNA replication proteins [BR:
ata03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
AWN88_11650
Chromosome and associated proteins [BR:
ata03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
AWN88_11650
DNA repair and recombination proteins [BR:
ata03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
AWN88_11650
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
DUF2267
HU-CCDC81_euk_2
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
AMD58967
UniProt:
A0A0X8IY43
LinkDB
All DBs
Position
linear:80337..80612
Genome browser
AA seq
91 aa
AA seq
DB search
MNKNELVSAVAEKAGLTKADAASAVDAVFETVQSELKNGGDIRLAGFGSFSVSRREASKG
RNPSTGAEVDIPARNVPKFSAGKGLKDAVNS
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagaacgagctcgtctctgctgttgccgaaaaggctggtctcacgaaggcagat
gctgcttccgctgttgatgccgtattcgaaaccgtacagagcgaactgaagaacggtggc
gatatccgcctcgccggctttggcagcttctccgtcagccgtcgtgaagcctccaagggc
cgtaacccttccacgggtgctgaagtcgatatcccggctcgcaacgttccgaagttctcc
gcaggcaagggcctgaaggacgccgtcaactcgtaa
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