Agrobacterium tumefaciens S33: AWN88_12520
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Entry
AWN88_12520 CDS
T04213
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
ata
Agrobacterium tumefaciens S33
Brite
KEGG Orthology (KO) [BR:
ata00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ata03032
]
AWN88_12520
03400 DNA repair and recombination proteins [BR:
ata03400
]
AWN88_12520
Enzymes [BR:
ata01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
AWN88_12520
DNA replication proteins [BR:
ata03032
]
Prokaryotic type
DNA Topoisomerases
AWN88_12520
DNA repair and recombination proteins [BR:
ata03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AWN88_12520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
AMD59123
LinkDB
All DBs
Position
linear:269785..272577
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AA seq
930 aa
AA seq
DB search
MTDQSPPGGGKLPPGIEPISIMEEMQRSYLDYAMSVIVSRALPDVRDGLKPVHRRILYGM
SELGIDWNKKYVKCARVTGDVMGKFHPHGNSAIYDALARMAQDWSLRLPLIDGQGNFGSI
DGDPPAAERYTECRLDKAAHSLLDDLDKETVDFRDNYDGTLQEPVVIPAKFPNLLVNGAG
GIAVGMATNIPPHNLSEVIDGCIALIDNPAIELPELMQIIPGPDFPTGALIMGRSGIRSA
YETGRGSVIMRGRATIEPMRGDREQIIITEVPYQVNKASMIEKMAELVKEKRIEGISDLR
DESDRQGYRVVIELKRDANADVILNQLYRYTPLQTSFGCNMVALNGGKPEQMTLLDMLRA
FVSFREDVVSRRTKYLLRKARERAHVLVGLAISVANIDEVIRVIRHAPDPASAREELMTR
RWPAQDVESLIRLIDDPRHRINEDGTYNLSEEQARAILELRLARLTALGRDEIGDELNKI
GAEISEYLEILSSRLRIMQIVKDELSAVRDEFGTPRRSEIVEGGPDMDDEDLIAREDMVV
TVSHLGYIKRVPLTTYRAQRRGGKGRSGMATRDEDFVNRLFVANTHTPVLFFSSRGIVYK
EKVWRLPIGTPQSKGKALINMLPLEPGERITTIMPLPEDETTWETLDVMFSTTRGTVRRN
KLGDFVQVNRNGKIAMKLDEEGDEILSVETCTDRDDVLLTTALGQCIRFPVDDVRVFAGR
NSVGVRGINLAEGDRIISMTIVGHVEAEPWERAAYLKRSAAERRAAGVDEDDIALVGEEV
TEEGELSEERYQELKAREEFVLTVSVKGFGKRSSSYDFRTSGRGGKGIRATDTAKTSEIG
ELVAAFPVEEGDQIMLVSDGGQLIRVPVNGIRIASRATKGVTIFSTAKDEKVVSVERINE
PEGDDEAENGNGEEADDNLQTTPEAPESEA
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
ttgactgaccagagcccccccggcggcggaaagcttccgccaggcattgaaccgatttcc
atcatggaggaaatgcagcggtcgtatctcgattacgccatgagcgttatcgtgtcccgc
gcgcttcccgatgtgcgagacggcctgaagccggttcatcgccgtattctgtacggcatg
tccgaactcggcatcgactggaacaagaaatacgtcaaatgcgcccgcgtaaccggggac
gtgatgggtaaattccatccgcacggcaactcggcaatctatgacgcgctggcgcgtatg
gcgcaggactggtcgctccgcctgccgctgatcgacggccagggcaacttcggctccatc
gacggtgatccgccggccgctgaacgttataccgaatgccgtctggataaggccgcgcat
tcgctgcttgacgatctcgacaaggaaacggtcgatttccgtgacaactatgacggcacc
ttgcaggagccggtcgtcattccggccaagttcccgaacctgctggtcaacggggcaggc
ggcatcgcggtcggcatggccacgaacatcccgccgcataacctgtcagaggttatcgat
ggctgtatcgccctgatcgacaatccggcgatcgagctgccggaactgatgcagatcatt
ccgggccctgatttcccgaccggtgcgctgatcatgggccgttccggcatccgctcggct
tacgaaacgggccgcggatcggtcatcatgcgtggccgcgcgacaatcgagccgatgcgt
ggcgaccgcgagcagatcatcatcaccgaagttccctatcaggtgaacaaggcgtcgatg
atcgaaaaaatggctgaactggtcaaggaaaagcgcatcgagggcatttccgacctgcgc
gacgaatccgaccgccagggttatcgcgtcgtcatcgaattgaagcgcgacgccaatgca
gacgtcatcctgaaccagctttaccgctacacaccgctgcagacctcgtttggctgcaac
atggtggcgctgaacggcggcaagcccgagcagatgacgctgctcgacatgttgcgtgct
ttcgtgtccttccgcgaagatgtcgtcagccgtcgcacgaaatacctgctgcgcaaggcg
cgcgagcgggcgcatgtgttggtcggtctggcgatttccgtcgccaatatcgatgaggtc
atccgcgtcatccggcatgctcccgatccggcttcggcccgagaagaattgatgacgcgt
cgctggcctgcacaggatgtggaaagcctgatccgcctcatcgatgatccgcgccaccgc
atcaacgaagacgggacttacaacctttccgaggaacaggcccgcgccattctcgaattg
cgtcttgcgcgccttacggcgctcggccgggatgaaattggcgacgagctgaacaagatc
ggcgctgagatcagcgaatatctggaaatcctgtcatcgcgcctgcgcatcatgcagatc
gtcaaggacgagctttccgccgtccgcgacgaattcggtacgccgcgtcgctccgagatt
gtcgagggcggtcccgatatggacgatgaagacctcatcgcccgcgaagacatggtcgtg
accgtttcgcatctcggttacatcaagcgcgtgccgctgacgacgtatcgtgcacagcgt
cgcggcggcaagggtcgctccggcatggcaacgcgcgatgaggatttcgtcaaccgtctg
ttcgtcgccaacacccacacgccggtcctgttcttctcctcgcgtggcatcgtctacaag
gaaaaggtctggcgtctgccgatcggcacgccgcagtccaagggcaaggcccttatcaac
atgttgccgctggaacccggcgagcgcatcaccaccatcatgccgttgcccgaggacgaa
acgacctgggaaacgcttgacgtgatgttctcgacgacgcgcggcacggttcgccgcaac
aagctcggcgatttcgtacaggtcaaccgcaacggcaagatcgccatgaagctggacgag
gagggcgatgaaatcctctccgtcgaaacctgtacggaccgcgacgatgtgctgctgacg
accgcgctcggccagtgcatccgcttccccgtggacgatgtacgcgtctttgccggccgc
aattccgtcggcgtgcgcggcatcaacctggccgaaggcgaccgcatcatctccatgacc
attgtgggccatgtggaagcggagccgtgggagcgtgcggcttacctcaagcgctcggct
gccgaacggcgtgccgcaggcgtggatgaggacgatatcgcgctcgtcggtgaggaagta
acggaagagggcgaactcagtgaggagcgctaccaggaactgaaggcgcgcgaagaattc
gtgctgacggtttccgtgaagggcttcggcaagcgttcctcgtcttacgatttccgcact
tcaggccgcggcggcaagggcatccgcgccaccgataccgcgaagacgtcggagatcggt
gaacttgtcgcggccttcccggtggaagaaggcgaccagatcatgctggtttccgatggc
ggacagctcatccgtgtgcctgtgaacggcatccgcatcgccagccgcgcgaccaagggt
gtgacaatcttctcgaccgccaaggatgagaaggtggtttccgtggagcgcatcaacgag
cctgaaggcgacgacgaggctgaaaatggcaatggcgaggaggcggatgacaatctgcag
accacgccggaggcaccggaaagcgaggcgtaa
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