Agrobacterium tumefaciens S33: AWN88_12865
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Entry
AWN88_12865 CDS
T04213
Name
(GenBank) preprotein translocase subunit SecD
KO
K12257
SecD/SecF fusion protein
Organism
ata
Agrobacterium tumefaciens S33
Pathway
ata02024
Quorum sensing
ata03060
Protein export
ata03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
ata00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
AWN88_12865
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
AWN88_12865
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AWN88_12865
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ata02044
]
AWN88_12865
Secretion system [BR:
ata02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
AWN88_12865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_SecF_C
SecDF_P1_head
SecD_1st
Sec_GG
ACR_tran
SecD-TM1
MMPL
Sterol-sensing
RE_XcyI
FLgD_tudor
Motif
Other DBs
NCBI-ProteinID:
AMD59180
LinkDB
All DBs
Position
linear:complement(334501..337065)
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AA seq
854 aa
AA seq
DB search
MLHFSRWKTVFIWLLVLASVVIASPNLFTDKQLEGMPAWYKDNKVTLGLDLQGGSHIMLK
IERSDIVKERLETIVGDVRTQLRDANIRYSGLTGNGQQIQVRISDPAQLEAAKNALRDLT
QPVSAGTLVGGSITEVTMNDGGDNLLRLNLTDEGIDYRLSSAVSQSIEVVRRRVDEVGTT
EPLIQRQGSDRIIVQVPGLQDPQRLKSLLNQTAKLSFRMVDTTMPVQEAMNGRPPATSEV
LYSQDDPPVPYLVERRALVSGDNLVDAQASFNQQTNEPVVTFRFDSRGAQRFAQATQQNV
GKPFAIVLDNQVISAPVIREPIIGGSGQISGNFSVQGANDLAVLLRAGALPATLTVVEER
TVGPSLGNDSITAGLTASAIGAVGVLIFMFVFYGFFGLLANIALVVNVIMLLAVLSVIGS
TLTLPGIAGIVLTIGMAVDSNVLIYERIREEVKSGKPLIQSLDNGFTRAFATIIDANLTT
LIVASVLFYMGTGPVKGFAVTLAVGIITTVFTAYTLTAWMFGYWVRRSRPKHLPKGVRTA
MFDGRDIPFMRYRRVVFMITGVIMLACVGGFIAKGLNLGIDFQGGSVIEVRAKQGEADLA
DIRDRLNQLNLGEIQAQNFGTPQDVLIRIQAQEGGENAEQSAITMVRGELEDKYDFRRVE
VVGPAVSGDLTFTSTIGILLAMTAIMIYIWVRFEWQFALGAVISMVHDVVFTIGLFVFLG
IEFNLTSIAAILTIIGYSLNDTVVIYDRIRENLRRYKKMPLSMIIDVSLNQTLSRTILTG
LTVLLALLALYLFGGEVIRSFTFAMLFGVGIGVFSSLYIAAPVLIAFKLRPDSKDAEDEK
DEKSGNAIGGKPAV
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atgcttcatttttcccgttggaaaacagtcttcatctggctgcttgtgctggcaagcgtc
gtcatcgcctctcctaatctgtttacggacaaacagctggagggcatgcctgcctggtac
aaggacaacaaggtaacgctcggtctcgaccttcagggcggttcccacatcatgctcaag
atcgagcgttccgacatcgtcaaggaacggctcgaaaccatcgtgggcgatgtgcgaacg
cagcttcgcgatgccaacatccgttattcgggcttgaccggcaacggccagcagattcag
gtccgcatcagcgatccggcgcagctggaagccgccaagaacgcacttcgcgacctgacg
cagccggtatccgccggtacgctggtcggcggctccattaccgaagtgacgatgaatgat
ggtggcgacaatctgctgcgtctcaatctcacggatgagggcatcgattaccgcctgtca
tcagccgtttcgcagtccatcgaagtcgtgcgccgccgcgttgacgaagtcggtacgacc
gagccgctcatccagcgtcagggttccgaccgcatcatcgtgcaggtgcctggtcttcag
gatccgcagcgcctgaagtcacttctcaaccagacggcaaagctctccttccgcatggtt
gacaccaccatgccggtgcaggaagccatgaacggccgtccgccagcaacgtccgaggtt
ctctattcgcaggacgatccgccggttccctatcttgtggagcgccgtgcgctcgtttcc
ggcgacaatctcgtcgacgcgcaggcaagcttcaaccagcagaccaatgaacccgtcgtc
accttccgcttcgacagccgcggcgcgcagcggtttgcgcaggcgacgcagcagaatgtc
ggcaagcctttcgccatcgtgctcgataatcaggtcatttccgcgcctgtcatccgtgag
ccgatcattggcggttcgggccagatttcaggtaatttctcggtgcagggcgcgaacgac
cttgctgtgctgctgcgcgccggtgcgctgccggcgacgctgacggtggttgaagagcgt
accgtcggtccgagcctcggtaacgactccattaccgccggtctgacggcaagcgccatt
ggcgccgtgggcgtcctcatcttcatgttcgtgttctatggcttcttcggcctgctggcg
aatatcgctcttgtggtcaacgtcatcatgctgctggccgtcctcagcgtgatcggatcg
acgctgacactaccgggtatcgccggtatcgtcctgaccatcggcatggctgtcgattcc
aacgttctgatctacgagcgaatacgcgaagaggtgaaaagcggcaaaccactgatccag
tcactggataatggctttacccgcgcctttgcgaccatcatcgacgccaacctgacgacg
ctgatcgtggcgagcgtgctgttctacatgggcacgggtccggtcaagggctttgcggtt
acgctggccgtcggtatcatcacgaccgtcttcacggcctatacactgacggcgtggatg
ttcggttactgggttcgccgcagccgtccgaagcatctgccgaagggcgttcgtaccgcc
atgttcgatggtcgcgacatcccgttcatgcgctaccgtcgcgtggtgttcatgatcacc
ggcgtcatcatgcttgcctgcgttggcggtttcatcgccaagggcctgaacctcggtatc
gacttccagggcggctccgtcatcgaagtccgtgccaagcagggtgaggccgatctggcc
gatatccgcgatcgtctgaaccagctcaacctgggtgaaatccaggctcagaatttcggt
acgccgcaggatgttctcatccgcattcaggcgcaggaaggcggcgaaaatgccgagcaa
tccgccatcaccatggtgcgcggcgagcttgaggacaaatacgacttccgccgcgttgaa
gttgtcggccccgccgtttccggtgacctcaccttcacctccacgatcggcatcctgctc
gccatgacggcgatcatgatctacatctgggttcgcttcgaatggcagtttgcgctcggc
gccgtcatttcgatggtgcacgacgtggtcttcacaatcggcctcttcgtgttcctgggg
atagagttcaacctcaccagtatcgcggcgatcctgacgattatcggttattcgctgaat
gacaccgtcgtcatctatgaccgtatccgcgaaaacctcaggcgctataaaaagatgccg
ctgtcgatgattatcgacgtgtcgctgaaccagacgctgtcgcgcaccatcctcaccggc
ttgaccgtgcttctggcgctgctcgcgctctacctcttcggtggcgaggtcatccgctcc
ttcaccttcgccatgctcttcggtgtcggtatcggcgtgttctcgtcgctctacattgcc
gctccggtgctgatcgccttcaagcttcgtcctgatagcaaggacgcggaagacgagaag
gatgaaaagtccggcaacgccatcggcggcaagcccgccgtctga
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