Agrobacterium tumefaciens S33: AWN88_15050
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Entry
AWN88_15050 CDS
T04213
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
ata
Agrobacterium tumefaciens S33
Pathway
ata03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ata00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AWN88_15050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ata03400
]
AWN88_15050
DNA repair and recombination proteins [BR:
ata03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AWN88_15050
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AWN88_15050
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
AAA_16
Kinesin
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
AMD61518
LinkDB
All DBs
Position
linear:762208..765177
Genome browser
AA seq
989 aa
AA seq
DB search
MARSPKNSTSSPSGFEEAPQSSFEGAPLGGSVADWVKQLEAEAEASSVETQREIASKAGK
HRKKIEIEARKEAEKAATKTAKKTTASKTARGVSIGASSDPKTRAAAGLNPVAGLDVSLE
DAQSLAPGAVTATVDALSKLIESGNPLFKDGKLWTPHRPARPPKSEGGIAIEMVTDYKPS
GDQPTAIADLVEGLNSGDRSQVLLGVTGSGKTFTMAKVIEATQRPAVILAPNKTLAAQLY
SEFKNFFPNNAVEYFVSYYDYYQPEAYVPRSDTYIEKESSINEQIDRMRHAATRAILERD
DCIIVASVSCIYGIGSVETYTAMTFQMQVGDKLDQRQLLADLVAQQYKRQDINFVRGSFR
VRGDTIEIFPAHLEDAAWRISMWGDEIESITEFDPLTGHKTGDLQSVKIYANSHYVTPRP
TLNGAIKSIKEELKLRLAELEKAGRLLEAQRLEQRTRYDVEMLEATGSCAGIENYSRYLT
GRNPGEPPPTLFEYIPDNALIFIDESHVTVPQIGGMYRGDFRRKATLAEYGFRLPSCMDN
RPLRFEEWDAMRPQTISVSATPGGWEMEQSGGVFAEQVIRPTGLIDPPVEVRSARTQVDD
VLGEIRETAAKGYRTLCTVLTKRMAEDLTEYLHEQGVRVRYMHSDIDTLERIEIIRDLRL
GAFDVLVGINLLREGLDIPECGFVAILDADKEGFLRSETSLIQTIGRAARNVDGKVILYA
DNITGSMKRAMEETSRRREKQMAYNQEHGITPESVKARISDILDSVYERDHVRADISGVS
GKGFADGGHLVGNNLQAHLNALEKSMRDAAADLDFEKAARLRDEIKRLKAAELATMDDPM
AKEEARAVEGGGKNNRRSHLSISSPEGETAGRADGDAASTNESGKSLFAKPSLDEMGPGS
DAGKPLFRKNTLDEMTVGRTEKPVRGAVPDKPATEPGKRFSPLLEGQPERATDDPRPLVR
GKIGAGSYEDAGEQKRKSRTKGKTGGPGR
NT seq
2970 nt
NT seq
+upstream
nt +downstream
nt
atggccagatcaccgaaaaactccacctcctcgccctcgggcttcgaggaagctccgcaa
tcgtcattcgaaggcgcgccgctcggcggcagcgttgccgattgggtcaagcaacttgag
gcggaagcggaagcatcctccgtggagacccagcgcgaaatcgcttcgaaggcgggcaag
caccgcaagaagatcgaaatagaagcgcgcaaggaagcggaaaaggccgccacaaagacg
gcgaaaaagaccaccgcgtccaaaacggcgcgcggcgtttcgatcggcgcgtcgagcgat
ccgaaaacgcgcgccgccgcgggtctcaatcctgtggcagggctcgatgtctccttggag
gatgcccagtccctggcaccgggcgcggtgacggcgacggtggacgcgctttccaaactg
attgaaagcggcaacccgctcttcaaggatggcaagctgtggacaccccacaggccggcc
cgtccgccgaaatcggaaggcggcatcgccatcgagatggtgacggactacaagccatcc
ggcgatcagccgaccgccattgccgatctcgtcgaaggcctcaattccggcgaccgctcg
caggtgctgctcggcgtcaccggctccggcaagaccttcaccatggccaaggtgatcgag
gccacacagcgcccggccgttattctggcgcccaacaagacgctggcggcccagctctat
tccgaattcaaaaacttctttccaaacaatgcggtggagtatttcgtttcctattacgat
tattaccagccggaagcctatgtgccgcgttccgacacctatatcgagaaggaatcgtcg
atcaacgagcagatcgaccgtatgcgccacgccgcaacccgcgccattctcgaacgtgac
gactgtatcatcgtcgcttcggtttcctgtatctatggtatcggttcggtcgagacctat
acggccatgaccttccagatgcaggtaggcgacaagctggatcaacgccagcttcttgcc
gacctcgtggcccagcaatacaagcggcaggacatcaacttcgtgcgcggctccttccgc
gtgcgcggtgatacgatcgaaatcttccccgcccaccttgaagatgcggcctggcgcatt
tccatgtggggtgacgagattgaatccatcaccgaattcgacccgctgaccggccataag
accggcgacctgcaatcggtgaagatttacgccaattcgcactatgtgacaccgcgcccg
acgctgaacggcgcgatcaagtcgatcaaggaagagctgaagctgcgcctcgccgagctt
gaaaaagccggccgcctgctggaagcccagcgtctggaacagcgcacgcgctacgatgtg
gagatgctggaggccacgggctcctgcgccggcatcgaaaactattcacgctatctcacc
ggccgcaatccgggcgagccgccgccgaccctgttcgagtatattcccgacaatgcgctg
atcttcatcgacgaaagccacgtcaccgttcctcagatcggcggcatgtatcgcggcgac
ttccgccgcaaggcaacgctggccgaatatggcttccgcctgccctcgtgcatggacaac
cgtcccctgcgcttcgaggaatgggacgccatgcgcccgcagaccatttccgtctccgcc
acccccggaggctgggaaatggagcaatccggcggcgtttttgccgaacaggtcatccgt
ccgaccggcctcatcgatcctccggtcgaagtccgctccgcccgcacccaggtggacgat
gttctcggcgaaatccgcgagaccgccgccaagggctaccgcacgctctgcaccgtgctg
accaagcggatggccgaagacctcaccgaatatctgcatgaacagggtgtccgcgtccgt
tacatgcactccgatattgacacgctggagcgcatcgagatcatccgcgacctgcggctc
ggcgctttcgacgtgctcgtcggcatcaacctgctgcgcgagggtctcgatattccggaa
tgtggtttcgtagccatcctcgacgcagacaaggaaggcttcctgcgctcggagacctcg
ctgatccagaccatcggccgcgccgcgcgtaacgtcgatggcaaggtcatcctttatgcc
gacaatatcaccggttcgatgaagcgggcgatggaggaaacctcccgccgccgtgaaaag
cagatggcctataaccaggaacatggcatcacgccggaatcggtcaaggcgaggatctcc
gacattcttgattccgtatatgaacgcgaccacgtaagagccgatatttcaggcgtttcc
ggcaagggcttcgccgatggcggtcatctggtcggcaacaatctccaggcgcatctcaac
gcgctggaaaaatccatgcgcgacgccgcagcggacctcgactttgaaaaggcagcccgt
ctgcgcgacgaaatcaaacgcctcaaggcagccgaacttgccaccatggacgaccccatg
gccaaggaagaagcacgtgcggtcgaaggcggcgggaaaaacaacagacggagccacttg
tcgatttcctcccctgagggggagacagccggcagggcagacggggatgccgcttccacg
aacgaaagcgggaagtctctcttcgccaaaccttcgctggacgagatgggtccgggctcc
gacgcaggaaaaccgcttttccgcaagaacacgctggacgagatgaccgtgggtcggacc
gaaaagcccgtaaggggcgcggtgcccgataagcccgcgaccgaacccggcaagaggttc
tccccgctgctggaaggccagcccgaacgcgccacagacgatccgcggccgctggtccgt
ggtaagatcggcgccggttcctatgaagatgccggagagcagaagcgcaaaagcaggacc
aagggcaagactggcggtccgggccgctga
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