Agrobacterium tumefaciens S33: AWN88_15320
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Entry
AWN88_15320 CDS
T04213
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ata
Agrobacterium tumefaciens S33
Pathway
ata03420
Nucleotide excision repair
ata03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ata00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AWN88_15320
03430 Mismatch repair
AWN88_15320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ata03400
]
AWN88_15320
Enzymes [BR:
ata01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AWN88_15320
DNA repair and recombination proteins [BR:
ata03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AWN88_15320
MMR (mismatch excision repair)
Other MMR factors
AWN88_15320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
PcrA_UvrD_tudor
Peptidase_M13
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AMD61521
LinkDB
All DBs
Position
linear:821231..823705
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AA seq
824 aa
AA seq
DB search
MSNSFDDMPFFDEEPVAPRRATNNAPSENGGGLGIAARAMAARDQTRAAPDYLSGLNPEQ
RDAVETLDGPVLVLAGAGTGKTRVLTTRIAHILATGRAYPSQILAVTFTNKAAREMKERI
GVLVGGAVEGMPWLGTFHSIGVKLLRRHAELVGLKSDFTILDTDDVVRLIKQLIQAEGLD
DKRWPAKQFAGMIDGWKNKGLTPPDIPEGDSRAFANGKGRELYTAYQNRLKTLNACDFGD
LLMHPISIFRRHADILKEYHQKFRYILVDEYQDTNTAQYMWLRLLAQRAKGEPQNVCCVG
DDDQSIYGWRGAEVDNILRFDKDFPGAKVIKLERNYRSTEHILGAAGHLIAHNEGRLGKT
LFTERSSPDDEKVVVHAAWDSEEEARAVGEEIEQLQRKGNMLNDMAILVRASFQMREFED
RFVTLGLNYRVIGGPRFYERLEIRDAMAYFRLVCQPADDLAFERIVNTPKRGLGDTTIRN
LHDYARARDIPMLAAAADIIETDELKPKARKALFDVVQDFRRWQGLLENTEHTTLAEQIL
DESGYTAMWQADKTAEAPGRLENLKELIRSMEAFESMRGFLEHVALVMDAEQNENLDAVS
IMTLHSAKGLEFDTVFLPGWEEGLFPHQRALDEGGRSGLEEERRLAYVGITRAKKLCHIW
FVSNRRIHGLWQSTLPSRFLDELPPAHVDVAASDSNYGGYGGRGGYGQSRFDKADPFANT
YSTPGWKRAQQNRSDATRDNWGTRSGHAVERIGYGESGPRTRTIDGELVAKSVADTPSKF
FVGDRVFHIKFGNGNIAAIEGNKLTIDFDRAGQKRVLDGFVEKV
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacagttttgacgatatgccgttcttcgatgaggaacccgtggcgccgcgcagg
gcgacgaacaatgccccttcggaaaacggcggcgggcttggcattgccgcccgcgccatg
gctgcgcgcgatcaaacgcgtgccgcacccgattatctttccggcctcaacccggaacag
cgcgatgccgtggaaacgctggacgggccggttctcgtcctcgccggcgccggcaccggc
aagacccgtgttctgacaacccgcattgcccatattctcgcaacgggccgggcctatccc
agccagatccttgccgtgaccttcaccaacaaggccgcccgcgagatgaaggaacgcatc
ggcgttctcgtcggcggcgcggtcgagggcatgccctggctcggcacgttccactccatc
ggcgtcaagctgttgcgtcgtcacgccgaactcgtcggcctgaagtcggatttcaccatt
ctcgatacggatgacgtggtgcggctgatcaagcagctcatccaggccgaaggtctcgat
gacaagcgctggccggccaaacagttcgccggcatgatcgacggctggaagaacaagggc
ctgacgccgccggatattcctgaaggagacagccgcgccttcgccaatggcaagggccgc
gagctctataccgcctaccagaaccggctgaaaacgctgaatgcctgcgatttcggcgat
cttctgatgcacccgatcagcatcttccgccgccacgccgatattctgaaagagtatcac
cagaagttccgttacattctggtggacgaatatcaggacaccaacacggcgcaatatatg
tggctgcggctgcttgcgcagcgcgccaagggcgagccgcaaaacgtctgctgtgtgggt
gacgacgaccagtcgatctatggctggcgcggcgcggaagtggacaatatcctgcgcttc
gacaaggattttcccggcgccaaggtcatcaagctcgaacgcaattaccgctccaccgag
catattctcggcgcggccggccacctcatcgcgcataatgagggacgcctcggcaagacg
ctgtttaccgaacgcagcagccctgacgacgaaaaggtcgtggtgcatgctgcctgggat
tcggaggaggaagcccgcgcagtcggcgaagagatcgagcagcttcagcgcaaaggtaat
atgctgaacgacatggcgatcctcgtccgcgcctccttccagatgcgcgaattcgaagac
cgttttgtcacgctcggcctcaattaccgcgtcatcggcggcccgcgcttttatgagcgc
ctcgaaatccgcgatgccatggcctattttcgcctcgtctgccagccggccgacgatctc
gccttcgagcggatcgtcaatacgcccaagcgcggccttggcgatacgacgatccgtaac
ctgcacgactatgcgcgtgcccgcgacattccgatgctggcggcggcggccgacatcatc
gaaaccgacgagctgaaaccgaaggcccgcaaggcgctgttcgatgtggtgcaggatttc
cgccgctggcagggtctactcgaaaacaccgagcacaccacgcttgccgagcagattctc
gacgaaagcggctacaccgccatgtggcaggccgacaagacggccgaagcgcccggacgc
cttgagaacctgaaggaactcatccgctcgatggaagcctttgaaagcatgcgcggtttc
ctcgagcatgtcgccctcgtcatggatgccgagcagaacgaaaatctcgatgccgtctcc
atcatgacgctgcattccgccaagggtctggaattcgacaccgtcttcctgcccggctgg
gaagaaggcctgtttccgcaccagcgggcgctggatgaaggcggccgctccggtctggag
gaagaacgtcgtcttgcctatgtcggcattacgcgtgccaagaaactctgccatatctgg
ttcgtctcgaaccggcgcattcacgggctgtggcaatccaccctgccctcgcgcttcctg
gatgaactgccgcccgcccatgtcgatgtcgcagcatccgacagcaattacggcgggtat
ggcgggcgtggtggctacggacaatcgcgtttcgacaaggcagatccctttgcgaacacc
tattcaaccccgggctggaaacgtgcgcagcagaaccgtagcgatgccacccgcgacaac
tggggcacgcgctccggccatgcggtggaacgaatcggttatggcgaaagcggcccgcgc
acccgcaccatcgatggggaactggtggccaaatccgtggccgacacgccgtcaaaattc
ttcgtcggcgaccgcgtcttccacatcaagttcggcaacggcaatatcgctgccatcgag
gggaacaagctcaccatcgacttcgaccgcgccggccagaagcgcgtgctggatggattt
gtggaaaaggtttga
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