Agrobacterium tumefaciens S33: AWN88_17140
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Entry
AWN88_17140 CDS
T04213
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
ata
Agrobacterium tumefaciens S33
Pathway
ata03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ata00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AWN88_17140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ata03400
]
AWN88_17140
Enzymes [BR:
ata01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
AWN88_17140
DNA repair and recombination proteins [BR:
ata03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AWN88_17140
Prokaryotic type
AWN88_17140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AMD61555
LinkDB
All DBs
Position
linear:complement(1210252..1210944)
Genome browser
AA seq
230 aa
AA seq
DB search
MAEAGVKLEDSWKRVLSAEFASPYMQKLKEFLLAEKTAGKRIFPKGADYFRALDLTPLDE
VKVVILGQDPYHGAGQAHGLCFSVQPGVRIPPSLVNIYKELQADLGIRPVGHGFLESWAK
QGVLLLNSVLTVEEARAASHQGQGWEKFTDAVIRAVNDECDHVVFLLWGSYAQKKAAFVN
QRKHLVLRSPHPSPLSAHNGFFGNGHFSKANAFLISHGRDPIDWQLPETV
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggcaggcgttaaactcgaagacagctggaagcgcgtgctttccgcagaattc
gccagcccctacatgcaaaagctgaaagagttcctgcttgccgaaaagacagccggcaag
cgtatcttcccgaagggcgcggactatttccgcgctctcgatctgacaccgctcgatgag
gtgaaggtcgtcatattggggcaggacccctatcacggcgccggccaggcgcatggactg
tgcttttccgtgcagcccggcgtgcgcatcccgccctcgctcgtcaatatctacaaggaa
ttgcaggccgatctcggcattcgcccggtcggccacggttttctggaaagctgggcgaaa
cagggcgtgctactgctcaacagcgtgctgacggtggaagaggcccgcgccgcctcgcat
caggggcagggctgggaaaaattcaccgacgccgtcatccgcgccgtcaacgacgagtgc
gaccatgtcgtcttcctgctctggggttcctatgcccagaagaaggcggcctttgtgaac
cagcgcaaacatctagtgttgcgctcgccgcacccgtcaccgctttccgcccataacggc
tttttcggtaatggccatttttccaaggcgaatgcctttctcatctcccatggccgcgac
ccgatcgactggcaattgccggaaacggtgtaa
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