Agrobacterium tumefaciens S33: AWN88_18625
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Entry
AWN88_18625 CDS
T04213
Name
(GenBank) helicase
KO
K17675
ATP-dependent RNA helicase SUPV3L1/SUV3 [EC:
5.6.2.6
]
Organism
ata
Agrobacterium tumefaciens S33
Brite
KEGG Orthology (KO) [BR:
ata00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
ata03029
]
AWN88_18625
Enzymes [BR:
ata01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
AWN88_18625
Mitochondrial biogenesis [BR:
ata03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
AWN88_18625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
Motif
Other DBs
NCBI-ProteinID:
AMD60220
LinkDB
All DBs
Position
linear:complement(1545991..1549074)
Genome browser
AA seq
1027 aa
AA seq
DB search
MILSGRGVTAVLGPTNTGKTHYAIERMVAHGSGVIGLPLRLLAREVYTRLVEKVGAPNVA
LITGEEKISPPKAKYSVCTVEAMPRETTAAFVAIDEVQLAGDLERGHIFTDRVLHLRGRE
ETLLLGAGTMRPILEKLLPGITVVERPRLSQLFYAGQKKITRLPQRTAIVAFSADEVYAI
AELVRRQRGGAAVVLGALSPRTRNAQVGLYQSGDVEYLVATDAIGMGLNLDVDHVAFAQD
RKFDGYQFRNLNPGEIGQIAGRAGRHLRDGTFGVTGRVDPFDDELVERIETHQFDAVKVL
QWRTKNFDFSSIANLRASLDAAPAIQGLSRALPAIDQQALEYLSRYPEIIDVTTTDARVE
KLWEACALPDYRRIAPAQHADLISTLYFDLVKRGRVNEDFMAEQVRRADRTDGEIDTLSA
RIAQIRTWTYVSNRPGWLADPTHWQEKTREIEDRLSDALHERLTKRFVDRRTSVLMRRLR
ENAMLEAEISVNGDVFVEGHHVGQLAGFRFTPVPGMEGPDQKAVQAAAQKALALEYEARA
ARLHASGNGDLALSSDGLVRWLGEPVARLSAGDNIMKPRVILLADEQLSGNARDHALARI
ERFVNHQIATVLKPLDDISRAEDLQGLAKGLAFQLVENLGVLFRRDVAEDVKSLDQDARA
SMRRYGVRFGAYHVFLPALLKPAPAELVTLLWALKNDGLGKPGYGDLIPVLAAGRTSVVT
DASFERMFYKLAGFRFLGKRAVRIDILERLADLIRPLLQWKPGQQPRPEGAYDGRRFTTT
TAMLSILGATLDDMEEILKGLGYRADQVTAEEAQAFLAGQAGATAPAAPETTAGEEDSAE
TEQDEPASEEQASEAVAVVEGDVTEAPVAEAAGEEAAANEAAPAESGEAAEPKPVLLWRP
GGRNENQRGENRRPGNRGQGREQTAREQGERRGEGRRDNRDGANRDAANRGGEGERKRDG
GRPDRGNNRNNDRHDRGERKDRPERSDRGGKPQGQQRFEAKPPRKEKPLDPDSPFAKLAA
LKEQLKK
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
atgatcctgagcggccgcggtgtcacggccgttctcggccccaccaacaccggcaagacc
cattacgcgattgagcgtatggtggcgcatggcagcggtgtcatcggcctgccgctgcgc
cttttggcgcgcgaggtctatacccgtctggtcgaaaaggtgggggcgcccaatgtggcg
ctgataaccggcgaagaaaaaatctcacccccaaaagccaagtattccgtttgcacagtg
gaagccatgccgcgcgaaacgacggccgccttcgttgcaatcgatgaggtgcagctggca
ggcgatctcgaacgcgggcatatctttaccgaccgggttctgcatctgcgcggtcgggag
gaaacgctgctgctgggggcgggcacgatgcgcccgatcctcgaaaagctgctgccggga
attaccgtggtggagcgaccgcgtctgtcgcagcttttttatgccggccagaagaagata
acccgcctgccgcagcgcacggcgattgtcgctttttccgccgatgaggtctatgccatt
gccgaactggtgcgccgccagcggggcggcgcggccgttgtgctaggcgcgctttcgccc
cgcacgcgcaatgcgcaggtgggtctctatcagtccggcgatgtcgaatatctggtcgcg
acggacgctatcggcatgggccttaaccttgatgtcgatcacgtcgctttcgcgcaggac
cgaaaattcgacggttatcaattccgcaatctcaatccgggcgaaatcggccagatcgcc
ggccgcgccggccgccatcttcgtgacggcaccttcggggtgacaggccgtgtcgacccg
ttcgatgacgaactggtggagcggatcgagacgcatcagttcgatgcggtgaaggtgttg
cagtggcggacgaaaaacttcgatttttcctctatcgctaatctgcgtgcgagccttgac
gctgcgccggcgatccaggggctttcgcgcgccctgccggccatcgaccagcaggcgctg
gagtatctgtcccgttatcccgaaatcatcgacgtgacgacgaccgatgcacgggtggaa
aagctctgggaggcctgcgcgcttccggactatcgccgtatcgccccggcgcagcatgcg
gatctgatctccacgctctatttcgacctcgtcaagcgcgggagggtgaacgaggatttc
atggccgaacaggtgcgtcgcgccgaccgcacggatggagagatcgataccttgtctgcg
aggattgcgcagatcagaacatggacttatgtatcgaaccgcccaggatggcttgccgat
ccgacacactggcaagaaaagactcgggaaatcgaggatcgattgtccgatgcgctacat
gaaaggttgacgaaacgctttgttgatcgcaggacatctgtgctcatgaggcgcctgaga
gagaatgcgatgcttgaagctgaaatcagtgtaaatggtgatgtcttcgtagaaggtcat
cacgtcggccaattggccgggttccggttcacgccggtgccgggaatggaagggccggat
cagaaggccgtgcaggctgcggcgcagaaggcgctcgcgctcgaatacgaggcgcgtgcc
gcgcgtctgcacgccagtggaaatggcgatctcgctttgagctccgatggtctggttcgc
tggctgggcgagccggttgcccgtctttcggccggcgacaatatcatgaagccgcgggtg
atcctgctggccgacgagcagttgagcggtaatgcccgtgatcacgcgctcgcgcggatc
gagcgtttcgtcaaccaccagatcgcaaccgtgctgaagccgctggatgatatctcccgc
gcggaagaccttcagggtctcgcaaagggtctcgctttccagctggttgaaaatctcggc
gtgctgttccgtcgtgacgtcgcggaagacgtgaagtcgctggatcaggacgcgcgtgct
tccatgcggcgttacggcgtgcgtttcggcgcctatcatgtctttttgcctgcgctcctg
aagcccgctccggcagaacttgtgacgctgctctgggccttgaagaatgatggtcttggc
aaaccgggttatggcgacctcattcccgtgctggctgcaggccgcacctcggtcgttacg
gatgccagcttcgagcgcatgttctacaagcttgccggtttccgtttcctcggaaagcgc
gcggtgcgtatcgacattctcgagcgtctggccgatctcatccgtccgctgctgcagtgg
aagcccggccagcagccgcgccccgaaggcgcttatgatggccgtcgtttcacgacgacg
accgcgatgctttctattctcggcgcaacgctcgatgacatggaagaaatcctcaagggc
ctcggttaccgtgccgatcaggtgacggcggaagaggcgcaggccttcctcgccggccag
gcaggcgccaccgcgccggctgccccggaaacgacggcgggcgaagaggatagcgctgag
accgagcaggacgagccggcttccgaagagcaggcctccgaagcggttgctgttgtggaa
ggcgacgttaccgaggcgccggtcgcggaagccgccggtgaagaggctgctgcaaatgaa
gcggctccggcggaaagcggtgaggccgccgagccgaagcccgtgcttctgtggcgtccg
ggtggccgcaatgaaaaccagcgtggtgaaaaccgtcgtcccggcaatcgtggccagggt
cgtgagcagacagcgcgcgagcaaggcgagcgacgcggcgaaggccgccgtgacaatcgc
gacggggcaaatcgcgatgcagccaatcgtggcggcgagggcgagcgcaagcgtgacggc
ggccgtcccgatcgcggaaacaaccgcaataatgatcgtcatgatcgtggcgagcgcaag
gacaggccggagcgcagcgaccgtggcggaaagccgcagggccagcagcgtttcgaggcc
aagccaccgcgcaaggaaaagccgctggacccggattcgcctttcgcaaagctcgctgcc
ctcaaggagcagctgaagaagtaa
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