Agrobacterium tumefaciens S33: AWN88_19055
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Entry
AWN88_19055 CDS
T04213
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ata
Agrobacterium tumefaciens S33
Pathway
ata03030
DNA replication
ata03430
Mismatch repair
ata03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ata00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AWN88_19055
03430 Mismatch repair
AWN88_19055
03440 Homologous recombination
AWN88_19055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ata03032
]
AWN88_19055
03400 DNA repair and recombination proteins [BR:
ata03400
]
AWN88_19055
Enzymes [BR:
ata01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AWN88_19055
DNA replication proteins [BR:
ata03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AWN88_19055
DNA repair and recombination proteins [BR:
ata03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AWN88_19055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AMD60300
LinkDB
All DBs
Position
linear:1639304..1640002
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AA seq
232 aa
AA seq
DB search
MREIIFDTETTGLESKLDRIIEIGGVELINHFPTGRTLHLYINPEDRKVHPDALAVHGIT
DEFLQDKPKFAEVVDQIRDFFEGARWVAHNATFDMGFINAEFARLGIEPVAADLVTDTLS
LARRKHPMGPNSLDALCRRYGIDNSHRTKHGALLDSELLAEVYIEMIGGRQTALGFGSAA
RQETIVIEEDIPLEPLRRPRPLPSRLDAETVAAHGKLVLGMGDKAIWNRYQN
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgagatcattttcgatacggaaaccacaggtctggagtcgaagctggaccggatc
atcgaaatcggcggcgtggaactgatcaaccacttcccgactggccgcaccctgcatctt
tatatcaatcccgaagatcgcaaggttcatcccgatgcgcttgccgttcacggcattacc
gacgagttcctgcaggataagcccaaattcgctgaagttgtcgaccagattcgggatttc
ttcgaaggtgcgcgctgggtggcgcacaatgcaacattcgatatggggttcatcaacgcg
gaattcgcccgtctcgggatcgaaccggtcgccgctgatctggtgacggatacgctgtcg
cttgcccgccgcaagcaccccatgggaccgaattcgctggacgcgctttgccgccgttat
ggaatagacaattcccatcgcaccaagcatggcgcgcttcttgactccgagcttctggcc
gaagtctatatcgaaatgatcggcggccgccagaccgcgctcggcttcggctctgccgcc
aggcaggagaccattgtcattgaggaagacattccgctggagcccctgcgacggccccgc
cccctgccatcgcggctggatgcagagacggttgccgcccacggcaaactcgttctcggc
atgggggacaaggcgatctggaaccggtaccagaactga
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