Agrobacterium tumefaciens S33: AWN88_20100
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Entry
AWN88_20100 CDS
T04213
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
ata
Agrobacterium tumefaciens S33
Pathway
ata03030
DNA replication
ata03430
Mismatch repair
ata03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ata00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AWN88_20100
03430 Mismatch repair
AWN88_20100
03440 Homologous recombination
AWN88_20100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ata03032
]
AWN88_20100
03400 DNA repair and recombination proteins [BR:
ata03400
]
AWN88_20100
Enzymes [BR:
ata01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AWN88_20100
DNA replication proteins [BR:
ata03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AWN88_20100
DNA repair and recombination proteins [BR:
ata03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AWN88_20100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_gamma3
DUF3646
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
AAA_22
AAA_16
AAA_30
AAA_5
AAA_14
RuvB_N
AAA_19
AAA_24
AAA_18
AAA_assoc_2
TsaE
SRP54
DUF815
SKI
ABC_tran
VapE-like_dom
AAA_2
RNA_helicase
CbiA
AAA_33
Rad17
nSTAND3
AAA_28
Motif
Other DBs
NCBI-ProteinID:
AMD60472
LinkDB
All DBs
Position
linear:complement(1846970..1848844)
Genome browser
AA seq
624 aa
AA seq
DB search
MDDSVPTTSSESQVGTGYRVLARKYRPKDFSDLMVGQEPMVRTLTNAFETGRIAQAYMLT
GVRGVGKTTTARILARALNYKTDTIDKPTIDLRIPGEHCQAIMEGRHVDVIEMDAASHTG
IDDIREIIEQVRYRPVSARYKVYIIDEVHMLSTQAFNGLLKTLEEPPEHVKFIFATTEIR
KVPITVLSRCQRFDLRRISAADLVGLFTAIAGKEGFEAEPQALSMIARAAEGSARDGLSL
LDQAIAHGGGRVEAEAVRGMLGLADRARIVDLFQHVVKGDVAAALSEFNGQYEAGANPVV
VLNDLADFTHLVTRMKYVPDAAEDPSLSEIERVRGAEFADTIAVTALSRIWQMLLKGIPE
TENASRPAGAAEMVLIRLAHAANLPAPEDAARRLLELSNGDGGYANGGPSGGGNGGGARA
YSSAQTVAAGRPVDLPTQRQAAPQTSAILRAIPDSRPQEMQVAAPKTEERPEPKVPVNSV
QDIADLCQKNRDPVMRAKVRNFVRLVRLEPGRLDMRLGEGAPGSLPGELGVKLKEWTGIH
WIISLSKEQGEPTLVEAEGNARDARLVDARQDPDVAAILAQFPGAKITDVRIRAAAQDEA
EEIAPPSVAESSEGDILPGDDIEF
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atggacgacagcgtacccaccacatcaagcgaatcccaggtcgggaccggctatcgggta
ctggcgcgcaaatatcgcccgaaggatttttccgatctgatggtcggacaggagccgatg
gtccgcacgctgacaaacgcgttcgagaccggacgtattgcgcaggcctatatgctgacc
ggcgtccgcggcgtgggcaaaacgaccacggcccgcattctcgcccgagcgctgaattac
aaaaccgacaccatcgacaagccgaccatcgatctgcgcattcccggtgaacattgtcag
gcgatcatggaaggtcgccatgtcgacgtgatcgagatggacgccgcctcccataccggc
atcgacgatattcgcgaaatcatcgaacaggtgcgttatcgccctgtctcggcgcgttat
aaggtctatatcatcgacgaagtgcacatgctgtcgacgcaggctttcaacggcctgctc
aagacgctggaagagccgccggagcatgtgaagttcatcttcgccacaacggaaatccgc
aaggttccgatcacggttctgtcacgatgccagcgtttcgacctgcgccgcatcagcgcc
gccgatctcgtcggcctttttaccgccatcgccggcaaggaaggtttcgaagccgaaccg
caggcgctttcgatgatcgcccgcgcggcggaagggtctgcccgtgacggcctgtcgctg
ctcgatcaggcaatcgcccatggcggtggccgggtggaagctgaagcggtacgcggcatg
ctcggtcttgccgaccgggcccgcatcgtcgatctcttccagcatgtcgtcaaaggcgat
gtcgcggccgctctgtcggaattcaacggtcaatatgaggcgggcgcgaacccggttgtg
gtccttaacgatctcgccgatttcacccatctcgtgacccgcatgaaatatgtgccggat
gcagcggaagatccctcgctttctgaaatagagcgcgtgcgcggtgcggaatttgccgac
acgattgcggtcaccgcgctttcgcgcatctggcagatgttgctgaagggcataccggaa
acggaaaatgcctcgcgcccggccggtgctgccgaaatggttctcatccggctggcgcac
gctgccaatcttcccgcacccgaagatgctgcccggcgcttgctggagctttcgaacggt
gacgggggttacgccaatggcggaccttccggcggcggcaatggcggcggtgcgcgcgcc
tattcgtcagcacagaccgtggctgcgggacgacctgtcgatcttcccacccagcgccag
gcagcgccacagacctccgccatactgcgcgccattccagatagccgcccgcaggaaatg
caggtcgcagcaccgaaaacggaggagcggccggagccgaaagttcccgtcaattcggtg
caggatattgccgatctgtgtcagaagaaccgcgatcccgtcatgcgggcgaaagtgcgc
aacttcgtacggctggtacggctggagcccggccggctcgatatgcgcctcggggaaggt
gcccccggctccctgcccggcgaacttggcgtcaagctcaaggaatggaccggcatccac
tggatcatcagcctcagcaaggagcagggggaaccgacccttgtcgaggctgagggcaac
gcacgggacgcgcgtctcgtcgatgcacgccaggaccctgatgtggctgccatcctggcg
cagtttcccggcgcaaaaattaccgacgtgcgcatccgcgccgccgcacaggatgaggct
gaagagatcgcgccgccatcggttgccgaatcgagcgaaggcgacatccttcccggcgac
gacatcgagttttaa
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