Atopobium sp. oral taxon 416: J4859_00515
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Entry
J4859_00515 CDS
T07170
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
atb
Atopobium sp. oral taxon 416
Pathway
atb03030
DNA replication
atb03430
Mismatch repair
atb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
atb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
J4859_00515 (dnaX)
03430 Mismatch repair
J4859_00515 (dnaX)
03440 Homologous recombination
J4859_00515 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
atb03032
]
J4859_00515 (dnaX)
03400 DNA repair and recombination proteins [BR:
atb03400
]
J4859_00515 (dnaX)
Enzymes [BR:
atb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
J4859_00515 (dnaX)
DNA replication proteins [BR:
atb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
J4859_00515 (dnaX)
DNA repair and recombination proteins [BR:
atb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
J4859_00515 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNAX_ATPase_lid
DNA_pol3_gamma3
AAA_22
RuvB_N
DnaX_C
AAA_30
RCF1-5-like_lid
AAA_5
TIP49
AAA_16
Mg_chelatase
AAA_14
Rad17
AAA_19
AAA_24
AAA_assoc_2
AAA_7
RNA_helicase
TsaE
AAA_18
nSTAND3
ORC-CDC6-like
Fungal_trans_2
Motif
Other DBs
NCBI-ProteinID:
QUC03492
LinkDB
All DBs
Position
104815..107016
Genome browser
AA seq
733 aa
AA seq
DB search
MESLYRKYRPLTFQDVVGQQHVVSTLEHAVLEGRVTHAYLFCGPRGTGKTTMARIVAKAL
LCEKGPRQLPDGTCEQCRLIAEGCHPDVYELDAASRTGVDNVRDEIINRVNFAPVQGHYK
VYIIDEVHMLTTQAFNALLKTLEEPPEYVVFILCTTDPQKIPATILSRVQRFDFHVLSPT
EIEDRLSYVCKQEHFQSDPEALALIAQHARGGMRDALGMLEQISVFNDDDISVEAVKSAL
GEVTSKTLESVVTAIAQRDVSTLFEEIAHLVDDGEDLLQFVRELARVIRDIYVVSLVGID
QTAVLDSAVDPKELEREAKLFGSSDRLARILAVLGDVSNEMRTATNQRLELEIAMTKIAR
PQGDLTLEGLAERVDELEKAVQALSVPRAMPQRAPEPVTPQPTIPVRPGSRPQAPQPRPR
QTCRTYRQDAAPAQRQAAPQATSALTPHTTSRSDAARLQRAWNQVVSRLRQQDAAKATLL
TNAHAVADDGQTLTIEFPPGSSFSLNMLTRKDVDSVVRPTISAVFGNRVPQYVEQTKKTS
QSKPRTQRAANPVRQAPQPVQPPQAPAASKPAPSNSQPDPQEPVPYSQPAPQEPTPQPRP
QPPAPEPQPEPKPAPAPVNTESKPQEEQAPWEDAAAEEPVDYEPRDYDQAPPVAAAPESA
QPVQKAPQPQHVSTTDYPTQHKKQDVKPGVPIQEADGIPQDLADMLENVFGKGINVVIKP
SPDDTKKNNGNNR
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atggagtcactctacagaaaatatcgtccgttgacctttcaagatgttgtggggcaacag
cacgtcgtctcgaccctcgagcacgccgtgctcgaggggagggtgacgcacgcctatctc
ttctgtggtccccggggcactggcaagacgacgatggcacgaatcgtggccaaggcgctg
ctgtgtgagaaaggaccccgccaactccccgatggtacctgtgaacagtgtcgcctcatt
gccgaaggatgccatcccgacgtctacgagctcgatgcggcaagccgtaccggtgtggac
aatgtgcgcgatgagatcatcaaccgcgtgaacttcgctccggtccagggccactacaag
gtctacattatcgacgaggtccatatgctcacgacccaggccttcaacgcgctgctgaag
accttggaggagccgcctgagtatgtggtctttatcctgtgcaccaccgacccccaaaag
atccccgccacgatcctctcgcgtgtgcagcgctttgacttccatgtgctttcgcctacg
gagatcgaggataggctttcctatgtctgcaagcaggagcacttccaaagtgatcctgaa
gccctagcactcattgcccaacatgcgcggggcggaatgcgcgatgctctgggcatgctc
gaacagatctcggtcttcaacgacgacgacatctcggtggaggcggtcaagagcgccctc
ggtgaggtcacgagcaaaaccctcgagagcgtcgtcaccgctatcgcccaacgcgatgtc
tccacgttgtttgaggagatcgcacatcttgtggacgatggggaagacctcctacagttt
gtgcgtgagctcgcacgtgtcatccgtgatatctatgtcgtgtcactcgtagggatcgat
cagactgcggtgttggactcagcggtggatccaaaggaactggagcgggaagcgaagctg
tttggctcctctgaccgtctggcgcggatccttgcagtcttgggcgatgtctccaatgag
atgaggacggcgacaaaccagcgcctcgagttggagattgcgatgacaaagattgcccgg
ccacagggcgatctgacgctcgaaggtctggctgagcgtgtcgatgaactggaaaaagca
gttcaggcgctctcggttccaagagcgatgccgcaacgggctcctgagcccgtgacccca
caaccgacaatacctgtaagaccaggtagccgtccgcaggcgccacagccgcgtccccgc
caaacatgtcggacctatcgtcaggacgcagcgccggcacagcgccaggcggctccacag
gcaacaagcgctttgacaccgcatactacgtcgcgctcagatgcagccagactccagcgg
gcttggaatcaggttgtgtcccgtctgagacagcaggatgcggcaaaggcgaccttgctg
acgaatgcccatgcggtggcggatgatgggcagaccttaacgattgagtttccgccggga
tcttccttctcgctgaacatgctcaccagaaaagatgtcgactccgtcgtccgtcctacg
atcagtgcggtctttggcaacagggtgccgcagtatgtcgagcagaccaaaaagacctca
cagtcaaagccacgtacgcagcgggcagcaaaccccgtaaggcaggcaccacaaccggtt
cagccgcctcaggcccccgcggcttccaagcctgcaccgtcgaacagccaaccagatcct
caggagcctgtaccatacagccaaccggctccgcaagagcctacaccgcaaccacggcct
cagccaccggcacctgaaccccaacctgagccaaaaccagcccctgcgcctgtgaatact
gaaagcaaaccgcaggaagaacaggcaccgtgggaggatgcagccgctgaagaaccggtc
gactacgaaccgagggactatgatcaagctccaccggtcgcagcagcccctgagtcggct
cagcctgttcagaaggcgccccaaccgcagcacgtgagcacgacggattatccgacccaa
cataagaaacaggatgtgaagcctggggtacctatacaggaagctgatggaattcctcag
gatttggcagatatgctggaaaatgtctttgggaaaggtatcaatgtggtgatcaagcct
tccccagacgataccaagaagaacaacggtaacaaccggtaa
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