Atopobium sp. oral taxon 416: J4859_01170
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Entry
J4859_01170 CDS
T07170
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
atb
Atopobium sp. oral taxon 416
Pathway
atb00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
atb00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
J4859_01170 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
atb01007
]
J4859_01170 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
atb03016
]
J4859_01170 (lysS)
Enzymes [BR:
atb01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
J4859_01170 (lysS)
Amino acid related enzymes [BR:
atb01007
]
Aminoacyl-tRNA synthetase
Class II (A)
J4859_01170 (lysS)
Transfer RNA biogenesis [BR:
atb03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
J4859_01170 (lysS)
Prokaryotic type
Other AARSs
J4859_01170 (lysS)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
HD
Motif
Other DBs
NCBI-ProteinID:
QUC03603
LinkDB
All DBs
Position
234020..236353
Genome browser
AA seq
777 aa
AA seq
DB search
MAETTSTGQGKPSQNDERAQRRQRRTELMQEGINPYPIKSTVTAHAADLEKKYADLACGE
DTTDSVTVAGRIRALRKQGKIAFLILEDCTGSIQLFCRINTMAKEDWDLLSMLDMGDILQ
ASGYVVRTRRGQLSISPTKLILLSKSLRPLPEKFHGLQDKEVRYRQRYVDLIMNPEIREV
FRKRSAIISLIRRYMEADGYLEVETPIMHAIVGGANAKPFVTHFNALNRDFYLRIATELP
LKRLIVGGMERVFEIGRQFRNEGMDLTHNPEFTSMEAYCAYSDLEGMKRLSEGLFKAIAR
EVCGCKEGHEVITYQGQTIDMSGTWKSMSVAEVDSQVVGEHVDMDTPIDHLREVCERNGV
QTEKNWGVGKLLFTIYDQLGEDTIVNPTFVCDFPEEVSPLSKRREDDPRLTDRFELLIAG
REYANAFSELNDPIDQAGRFAEQVAAKDFGDDEAMGYDYDYVRALEYGMPPAGGVGYGID
RMIMLFCDQPSIRDVLLFPQMKPEKIAKEDIASQLPDTTDNPAASADALFDNAEKGASED
MASEKKEEAEANLSEPAVEDNGLSEAARAAIDADMSGKLEAGISRDQAMKLLKKYNKEPF
HVEHGETLEGLMRYFSKQYDPDNVDFWGIVGLLHDLDWEKFQDEKNHTVKTAELLAEVGA
TAQLAHAIMTHNSDNNEALPKPKLQMEKVLFACDEVSGLIQAAAKMRPSGSVTDMPLKSL
KKKFKDKRFAAGCNREVMREGAQYMGQEMNECLDAVLTAMKAIAPVGDIYAKSNGEQ
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atggctgagacaacaagtacgggacagggaaagccatcccaaaacgacgagcgcgcacag
cgcagacagcgccgtaccgagctgatgcaggagggcatcaacccgtatccgatcaaaagt
accgtcaccgcccatgccgctgacctcgagaagaagtacgctgacctggcttgtggggag
gacacgaccgattccgtgaccgttgcgggccgcatccgcgcgctgcgcaagcagggcaag
atcgccttcttgattctggaggactgcacgggctcgatccagctcttctgccggatcaac
accatggccaaagaggactgggatctcctctctatgctcgatatgggcgatatcctgcag
gcgagcggctacgtcgtgcgtactcgccgcgggcagctctccatctcgccgaccaagctc
atcctgctctcaaagagcctgcgtccgctgccggagaagttccatggcctgcaggacaaa
gaggtccgctaccgccagcgctacgttgacctgatcatgaacccggagatccgtgaggtc
ttccgcaagcgctccgcgatcatctcgctgatccgccgctatatggaggccgatggctac
ctcgaggtggagactccgatcatgcatgcgatcgtgggcggcgccaatgcgaagccgttc
gtcacgcacttcaatgccttgaaccgcgacttctatctgcgtatcgccaccgagcttcct
ctgaagcgtctgatcgtcggcggtatggagcgcgtctttgagatcggccgccagttcaga
aacgagggcatggacttgacgcacaacccggagttcacctcgatggaggcctactgcgcc
tactccgacctcgagggtatgaagcgcttgagcgaaggcctcttcaaggcgatcgcccgt
gaggtctgtggctgcaaggaaggccatgaggtgatcacctaccagggacagactatcgat
atgtccggtacctggaagagcatgtcggtagctgaggttgactcgcaggttgtcggcgag
cacgtcgatatggacaccccgattgaccacctgcgtgaagtgtgcgagagaaatggcgtt
cagacggagaagaactggggtgtcggcaagctcctcttcacgatctatgatcagctgggc
gaggatacgatcgtcaatccaacctttgtctgcgacttcccggaagaggtgagcccgctc
tccaagcgcagagaggacgatccgcgcctcaccgaccgctttgagttgctgatcgccggc
cgcgagtatgccaacgccttctctgagctcaacgaccccatcgaccaggctggccgcttt
gcggagcaggtcgctgcaaaggacttcggcgacgacgaggctatgggctacgactacgac
tatgtccgcgccctcgagtacggtatgccccctgccggcggtgtcggctacggtatcgac
cgcatgatcatgctcttctgtgaccaaccctctatcagagatgtcctgctcttcccgcag
atgaagccggagaagatcgcgaaggaggacatcgcctcacagctgccggataccacggac
aaccctgcagcctccgccgacgccctctttgacaatgcagagaaaggagccagtgaggat
atggcatcagaaaagaaagaagaggcagaggcaaacctgagtgagcctgctgtcgaggac
aacgggctctctgaggctgcccgggcggcgatcgatgccgatatgtcaggcaagcttgag
gcggggatttcccgcgatcaggcgatgaagcttctgaagaagtacaacaaggagcccttc
cacgtcgagcacggtgagactcttgagggattgatgcgctatttctcaaagcagtatgac
ccggacaacgttgacttctggggcatcgtgggcctgctccacgatctcgattgggagaag
ttccaggacgagaagaaccacaccgtcaagactgcagagctcctggctgaggtgggtgct
acggcgcagctcgcgcatgcgatcatgacgcacaactctgacaacaacgaggcgcttccg
aagccgaagctgcagatggagaaagtcctctttgcctgcgatgaggtgtcaggcctgatc
caagcggccgcaaagatgcgcccctccggctccgtcaccgacatgccgctcaagtcactg
aagaagaagttcaaggacaagcgcttcgccgcgggctgcaaccgcgaggtgatgcgtgaa
ggtgcccagtacatggggcaggagatgaacgagtgcctcgacgcggtcctgaccgcaatg
aaggcgatcgcccccgtgggagatatctacgcgaagtcgaatggcgagcagtaa
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