Atopobium sp. oral taxon 416: J4859_01640
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Entry
J4859_01640 CDS
T07170
Name
(GenBank) putative DNA binding domain-containing protein
KO
K03655
ATP-dependent DNA helicase RecG [EC:
5.6.2.4
]
Organism
atb
Atopobium sp. oral taxon 416
Pathway
atb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
atb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
J4859_01640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
atb03400
]
J4859_01640
Enzymes [BR:
atb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
J4859_01640
DNA repair and recombination proteins [BR:
atb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
J4859_01640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLFN_AlbA_2
HATPase_c_4
Motif
Other DBs
NCBI-ProteinID:
QUC03686
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All DBs
Position
319213..320712
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AA seq
499 aa
AA seq
DB search
MDLREQGEVPIAIPINFKELVSGSVVESSRIEAKEDFNPERVVHTICAFANDIDNIGGGY
VLIGVAEKNSLLQLPPKGISREQVDSVLKRLSQLCRGIEPHYEPIVEPKQVAENRYVIVI
WCPGGQGRPYKAYKNVYKKGSTERLYYIRKMASTPVATSEEERELYYVSSTIPFDDQANL
AAFPSDLSLALMRDHLKEIGSSLYEQSEHATLEELADDLQLLSGPPESLRPRNVGILMFS
DHIHTYFRYARIEVVDLPDPTGQNMVEKTFTGPIQRQLRDALTYIKNYMLESKIVKFADR
AESQTVFNYPYAAVEEILSNAVYHRSYKVSEPITVRKTPDALEITSYPGFDRSIKDSDIQ
SRNIRGRIYRNRRIGDFLKELHLIEGRNTGFPTTFRALADNGSPMPDFQMDENRNYLSVI
LHVHPAFQPQESRRDAGRRELEQRILDALPERPVLISELARLLGYKGITKRLRITVDAML
SEGTLRSVRDGARNRIARP
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
ttggacctgcgagagcagggggaggtccctatagcgatacccatcaacttcaaggagcta
gtgagtggttccgttgtcgagtcgtctcgcatcgaggcaaaggaggacttcaatcccgag
cgcgtcgtgcatacgatttgtgctttcgccaatgatatcgacaacatcggtggcggttac
gtgctcataggggttgctgagaagaactctttgctccagttgccaccgaaggggatatca
cgcgagcaggtcgacagcgttctcaagaggctgtcccagctatgccgggggatcgagcct
cactacgagcctatcgtggagccgaagcaggttgccgagaacaggtatgtaatcgtcata
tggtgtcccggcggacagggtaggccatacaaggcgtacaagaacgtttacaagaaaggc
tcgaccgagaggctctactacattcgaaagatggccagcactcctgtggctacgtccgag
gaggagagagagctttactatgtgtccagcaccattcccttcgatgatcaggccaacctt
gccgcttttcccagcgacctgagccttgcgttgatgcgtgatcacctaaaggaaattgga
agcagcctctacgagcagtccgagcacgcaactcttgaagagcttgctgacgacctgcag
ctgctgtcagggccacctgagagccttcgtccgcgcaacgtcggtatcctcatgttttcg
gaccacatccatacgtattttcgttacgcgagaatcgaggtcgtcgatctgcccgacccc
acgggtcagaatatggtcgagaaaaccttcaccggacctatccagcgccagctgcgagat
gctcttacttacatcaaaaactacatgcttgagtccaagatcgtgaagttcgccgatagg
gcagagtctcagaccgtgttcaactatccctatgctgctgtagaagagatactctccaac
gccgtgtaccaccggtcctacaaggtcagtgagccaatcacggtgcgaaagacgcctgac
gcgctcgagatcaccagctatcccggattcgaccgcagtatcaaggatagcgacatccag
tctcgcaacatccgtgggcgcatctaccgtaaccgccgtatcggtgactttctcaaggag
ctccacctcatcgagggaaggaacacagggttccccacgacgtttagggctctggcggac
aacggttctcccatgcccgacttccagatggacgagaatcgcaactacctctcggtaata
ctgcacgtccacccggcgttccagccgcaggaaagcaggagggacgcggggcggcgggaa
ctggagcagcggatactcgacgcgctgccggaacgaccggtgctcatctctgagctcgcg
aggctcctgggctataaaggcatcacgaagaggctccgcatcacggttgatgcgatgctg
tcggagggaactcttcgatccgtgcgggacggtgctaggaataggatcgccaggccatag
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