Atopobium sp. oral taxon 416: J4859_01780
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Entry
J4859_01780 CDS
T07170
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
atb
Atopobium sp. oral taxon 416
Pathway
atb00521
Streptomycin biosynthesis
atb00523
Polyketide sugar unit biosynthesis
atb00525
Acarbose and validamycin biosynthesis
atb00541
Biosynthesis of various nucleotide sugars
atb01100
Metabolic pathways
atb01110
Biosynthesis of secondary metabolites
atb01250
Biosynthesis of nucleotide sugars
Module
atb_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
atb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
J4859_01780 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
J4859_01780 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
J4859_01780 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
J4859_01780 (rfbB)
00525 Acarbose and validamycin biosynthesis
J4859_01780 (rfbB)
Enzymes [BR:
atb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
J4859_01780 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
Polysacc_synt_2
RmlD_sub_bind
NAD_binding_4
NAD_binding_10
NmrA
KR
Sacchrp_dh_NADP
Motif
Other DBs
NCBI-ProteinID:
QUC03712
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Position
344483..345502
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AA seq
339 aa
AA seq
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MPDIFEPTNIIVTGGCGFIGSNFVRWVVKNHPECHITVLDKLTYAGNPANIAGLPESQVE
LVVGDICDAELLDQLVPGHDAIVHYAAESHNDNSIADPEPFVQTNVVGTYRLLQAARKHD
VRYHHISTDEVYGDLALDEPRRFEPDDPYRPSSPYSSTKASSDLLVRAWERTYGIRATIS
NCSNNYGPYQHVEKFIPRQVTNILCGIRPKLYGTGENVRDWIHTEDHSRAVWDILTKGKI
GETYLIGANGEKSNIEVLREILSLMGQTEDAFDWVRDRPGHDRRYAIDPTKLERELGWKP
VHTDFAEGLAQTIEWYRTHESWWRPAKEATERKYSEQGQ
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgccagatatcttcgagccgacaaatatcatcgtcacgggcggctgcggcttcataggc
tccaactttgtgcgctgggtggtgaagaaccatccggagtgccacatcacggtcctcgac
aagctcacctatgcagggaaccctgcaaacattgcgggacttcctgaatcgcaggtggag
ctcgtcgtgggggatatctgtgatgcggagctgctggaccagctggtccccggacacgac
gcgatcgtccactatgcagcggagtcccacaacgacaactcaatagcagaccctgagccc
ttcgtgcagacaaacgttgtggggacctataggctgctgcaggcggcaaggaagcacgat
gttcgctaccaccacatcagcacggacgaggtgtatggggatttggcactcgatgagccg
cgccgcttcgagccggacgacccgtacaggccaagctcgccgtattcctccacaaaggca
tcctccgacctcttggtccgtgcctgggagaggacctacgggatccgcgccacaatctct
aactgctccaacaactacggaccctaccagcatgtggagaagttcataccgcgccaggtt
acaaatatcctctgtgggatacgccccaagctctacggcacgggcgagaacgtacgcgac
tggatacataccgaggaccactcccgcgccgtctgggacatcctcacgaaggggaagata
ggcgagacctacctcataggtgccaacggtgagaagagcaacatagaggtcctgcgcgag
atcctctccctcatgggccagacggaggatgccttcgactgggtgcgtgaccgccctggc
cacgacaggagatacgctatcgacccgacgaagctggagcgagagctcggctggaagccc
gtccacactgactttgcggaaggccttgcccagaccatagagtggtaccgcacgcatgag
agctggtggcgccctgccaaggaggccaccgagcgtaagtactccgagcaagggcagtag
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