KEGG   Atopobium sp. oral taxon 416: J4859_01780
Entry
J4859_01780       CDS       T07170                                 
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
  KO
K01710  dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
Organism
atb  Atopobium sp. oral taxon 416
Pathway
atb00521  Streptomycin biosynthesis
atb00523  Polyketide sugar unit biosynthesis
atb00525  Acarbose and validamycin biosynthesis
atb00541  Biosynthesis of various nucleotide sugars
atb01100  Metabolic pathways
atb01110  Biosynthesis of secondary metabolites
atb01250  Biosynthesis of nucleotide sugars
Module
atb_M00793  dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:atb00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 Biosynthesis of various nucleotide sugars
    J4859_01780 (rfbB)
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    J4859_01780 (rfbB)
   01055 Biosynthesis of vancomycin group antibiotics
    J4859_01780 (rfbB)
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    J4859_01780 (rfbB)
   00525 Acarbose and validamycin biosynthesis
    J4859_01780 (rfbB)
Enzymes [BR:atb01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.46  dTDP-glucose 4,6-dehydratase
     J4859_01780 (rfbB)
SSDB
Motif
Pfam: GDP_Man_Dehyd Epimerase 3Beta_HSD Polysacc_synt_2 RmlD_sub_bind NAD_binding_4 NAD_binding_10 NmrA KR Sacchrp_dh_NADP
Other DBs
NCBI-ProteinID: QUC03712
LinkDB
Position
344483..345502
AA seq 339 aa
MPDIFEPTNIIVTGGCGFIGSNFVRWVVKNHPECHITVLDKLTYAGNPANIAGLPESQVE
LVVGDICDAELLDQLVPGHDAIVHYAAESHNDNSIADPEPFVQTNVVGTYRLLQAARKHD
VRYHHISTDEVYGDLALDEPRRFEPDDPYRPSSPYSSTKASSDLLVRAWERTYGIRATIS
NCSNNYGPYQHVEKFIPRQVTNILCGIRPKLYGTGENVRDWIHTEDHSRAVWDILTKGKI
GETYLIGANGEKSNIEVLREILSLMGQTEDAFDWVRDRPGHDRRYAIDPTKLERELGWKP
VHTDFAEGLAQTIEWYRTHESWWRPAKEATERKYSEQGQ
NT seq 1020 nt   +upstreamnt  +downstreamnt
atgccagatatcttcgagccgacaaatatcatcgtcacgggcggctgcggcttcataggc
tccaactttgtgcgctgggtggtgaagaaccatccggagtgccacatcacggtcctcgac
aagctcacctatgcagggaaccctgcaaacattgcgggacttcctgaatcgcaggtggag
ctcgtcgtgggggatatctgtgatgcggagctgctggaccagctggtccccggacacgac
gcgatcgtccactatgcagcggagtcccacaacgacaactcaatagcagaccctgagccc
ttcgtgcagacaaacgttgtggggacctataggctgctgcaggcggcaaggaagcacgat
gttcgctaccaccacatcagcacggacgaggtgtatggggatttggcactcgatgagccg
cgccgcttcgagccggacgacccgtacaggccaagctcgccgtattcctccacaaaggca
tcctccgacctcttggtccgtgcctgggagaggacctacgggatccgcgccacaatctct
aactgctccaacaactacggaccctaccagcatgtggagaagttcataccgcgccaggtt
acaaatatcctctgtgggatacgccccaagctctacggcacgggcgagaacgtacgcgac
tggatacataccgaggaccactcccgcgccgtctgggacatcctcacgaaggggaagata
ggcgagacctacctcataggtgccaacggtgagaagagcaacatagaggtcctgcgcgag
atcctctccctcatgggccagacggaggatgccttcgactgggtgcgtgaccgccctggc
cacgacaggagatacgctatcgacccgacgaagctggagcgagagctcggctggaagccc
gtccacactgactttgcggaaggccttgcccagaccatagagtggtaccgcacgcatgag
agctggtggcgccctgccaaggaggccaccgagcgtaagtactccgagcaagggcagtag

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