Atopobium sp. oral taxon 416: J4859_02835
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Entry
J4859_02835 CDS
T07170
Name
(GenBank) DeoR/GlpR transcriptional regulator
KO
K03436
DeoR family transcriptional regulator, fructose operon transcriptional repressor
Organism
atb
Atopobium sp. oral taxon 416
Brite
KEGG Orthology (KO) [BR:
atb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
atb03000
]
J4859_02835
Transcription factors [BR:
atb03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
J4859_02835
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DeoRC
HTH_DeoR
HTH_11
HTH_20
HTH_5
HTH_24
HTH_IclR
GntR
Fe_dep_repress
HTH_AsnC-type
MarR
Put_DNA-bind_N
HTH_Crp_2
MarR_2
HTH_PafC
HTH_27
HTH_36
TrmB
Rrf2
HTH_38
FeoC
FaeA
Mga
HTH_23
Sigma70_r4
HTH_Tnp_ISL3
HTH_Mga
HrcA_DNA-bdg
HTH_29
Sigma70_r4_2
CggR_N
Phage_terminase
HTH_17
HTH_28
HTH_22
HTH_6
DUF2250
MerR
HTH_31
HTH_10
HTH_3
HTH_CodY
TFIIE_alpha
IF2_N
Dimerisation2
SpoIIID
Xre-like-HTH
AbiEi_4
DUF4423
Ribosomal_S25
RPA_C
Motif
Other DBs
NCBI-ProteinID:
QUC03905
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Position
520978..521727
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AA seq
249 aa
AA seq
DB search
MIARQRQNEILHSLKEEGTVSVSELADKLGVSESTVRRDLGELSSMGLLEKVHGGATALD
DEQALRDLTLDERVGLHKDDKQEIARFAAKLVGPNDCVYLDAGTTTHLIVEALDGTKARY
VTDSVTNALSLAEKNMKVVLVGGELKSATEALVGPEALETLLRYHFTLGFWGSNGIDATQ
GFTTPDCSEAMVKRISLEHCERPYVVADPSKFGHCAAVSFGDLEKATVLTTQVPPAFQRF
KNIKTVLKG
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgattgcgcgccaacgccaaaacgaaatccttcattccctcaaagaggagggcacggtc
tctgtctccgaactcgccgacaagctgggcgtttcagagtctaccgtccggcgtgatctg
ggcgagctgtcctccatggggctgcttgaaaaggtgcacggcggggcgactgcgctcgat
gacgagcaggcactcagagatctgacgcttgatgagcgggtaggcctgcataaggatgac
aagcaggagattgcccgctttgccgcgaaactcgtcggccctaacgactgtgtgtacctg
gatgcggggacgacgacccacctgattgtggaagcgctcgatgggacaaaggcacgctat
gtcaccgattcagtgaccaatgcgctttctctcgctgagaagaacatgaaggtcgtgctt
gtcggtggggagctcaagagcgcaaccgaagccctcgtgggcccggaggcgttggagacc
ctgctgcgctaccatttcacccttggcttttggggctccaacgggatcgacgcgacgcaa
ggttttaccacccctgactgctctgaagcgatggtcaagcggatctcgcttgagcactgt
gagcgcccctatgtggtagcggatccgagcaaattcggtcactgtgctgcagtctcgttt
ggggaccttgagaaagcgaccgtcctcacgacgcaggtaccccctgcatttcagcggttt
aagaacatcaaaaccgtgcttaagggctaa
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