Atopobium sp. oral taxon 416: J4859_06450
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Entry
J4859_06450 CDS
T07170
Symbol
ruvC
Name
(GenBank) crossover junction endodeoxyribonuclease RuvC
KO
K01159
crossover junction endodeoxyribonuclease RuvC [EC:
3.1.21.10
]
Organism
atb
Atopobium sp. oral taxon 416
Pathway
atb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
atb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
J4859_06450 (ruvC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
atb03400
]
J4859_06450 (ruvC)
Enzymes [BR:
atb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.10 crossover junction endodeoxyribonuclease
J4859_06450 (ruvC)
DNA repair and recombination proteins [BR:
atb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
J4859_06450 (ruvC)
RecFOR pathway proteins
J4859_06450 (ruvC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvC
DUF460
S-AdoMet_synt_N
Motif
Other DBs
NCBI-ProteinID:
QUC04559
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All DBs
Position
1197819..1198454
Genome browser
AA seq
211 aa
AA seq
DB search
MVIIGIDPGLAHTGWGIIETRGSEYHARAYGCIITKADTPLVERLGKIYQDLNDVIIQFE
PSELSIEKIFFGENSRSAIVTAHSRGAALVAAAEKNLKVGEYTPMQIKQAVVGTGSADKH
QVIFMVRNILHMDHDPHPDHCADALAAAICHANLRRTQNSSRYANGNRKTAAAVRAAELA
QEEWRRKQKASETAPATAARLEKMKRERYIR
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atggtcatcatcggaatcgatcccggcctggcgcacaccggctggggcatcattgagacg
cggggatcagagtaccatgcacgggcctatggctgcatcataacgaaggcggatacgccc
ttggtcgagcgcctcggcaaaatctatcaggacctcaacgatgtgatcatccagtttgag
ccatcggagctctcgatcgagaagatcttcttcggtgagaattctcgctccgcgatcgtc
accgcgcactcccgtggagcggcgctcgttgccgcagcggagaagaacctgaaggtcggg
gagtacaccccgatgcagatcaagcaggcggtcgtggggaccggctccgcagataagcac
caggtgatattcatggtgaggaatattctgcacatggaccatgacccgcacccggaccac
tgtgccgatgcgcttgcggcagcgatctgccatgcgaacctgaggcgcacccagaacagt
tcccgctacgcgaacggcaatcgcaagaccgcagcggcggtgcgggcagcggagcttgca
caggaagagtggcggcgcaagcagaaggcgagcgagaccgcgcctgcgacggcagcgcgc
cttgagaagatgaagagagagcggtatatacgatga
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integrated database retrieval system
