Atopobium sp. oral taxon 416: J4859_06505
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Entry
J4859_06505 CDS
T07170
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
atb
Atopobium sp. oral taxon 416
Brite
KEGG Orthology (KO) [BR:
atb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
atb03021
]
J4859_06505
Transcription machinery [BR:
atb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
J4859_06505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r4_2
Sigma70_ECF
HTH_3
GerE
HTH_23
HTH_10
HTH_Crp_2
HTH_28
HTH_24
MarR_2
IF2_N
HTH_37
HTH_Tnp_ISL3
HTH_31
DUF7645
HTH_36
Apolipoprotein
Phage_antitermQ
KORA
Trp_repressor
Complex1_LYR
UBA_6
Motif
Other DBs
NCBI-ProteinID:
QUC04569
LinkDB
All DBs
Position
1207512..1208381
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AA seq
289 aa
AA seq
DB search
MPKEGNESSTKEAAPKKDTAKEARKAARSKSRGRGKLAWDKRRTRELFHRYKDLGDMDAR
QQLIVSHLNLVGFLASRFKNRGEPLDDLIQVGTIGLIKAIDRFDPSRGLEFTTYATPTIL
GEIKRHFRDKGWSVRVPRRLQELSAKVNKTTDELTNELQRSPSVEEIAKRLNVSVDEVLE
AMESSSAYSSIPLEAGGFNGDDDAPSVLDHYASEDENLAFSDDRMVIEDAIKDFSPREQQ
VICMRFLDGLTQVEIAHKLGISQVQVSRLLRRTLKKIQEKIDPNSVKRS
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaagaaggaaatgaatcatcaacgaaagaggccgcgccgaagaaggataccgcg
aaggaggcccgcaaagccgcgcgttcaaagtcacgcggacgcgggaaacttgcatgggac
aaacggcgtacccgtgagctgtttcaccgctataaggatctgggcgacatggacgcccgc
cagcagctcatcgtctcccacctcaatctggtgggatttctggcctcacgctttaagaac
cgcggagaaccgcttgacgatctgatccaggtcggtacgatcggcttgatcaaagcgatc
gaccgcttcgacccgagccgcgggcttgagttcacgacctatgcgacgccgacgatctta
ggcgagatcaagcgtcactttcgcgataagggatggtccgtcagggttccgagaaggctt
caggagctctccgctaaggtgaacaaaacaactgacgagctcaccaatgagctgcagcgc
agcccctcggtggaggaaattgccaagcgcctcaatgtctcggtcgacgaggtcttggag
gccatggagtcaagcagcgcttacagctcaattccactggaggccggtggcttcaatggg
gacgacgatgcgccttccgtgcttgatcactacgcctcagaagatgaaaatcttgcgttt
tctgatgaccgtatggtgatcgaggatgcgatcaaggacttttcgccgcgtgagcagcag
gtcatctgcatgcgcttcctcgatggattgacgcaggtagagatcgcccacaagctgggg
atctcacaggttcaggtgtcacgtctgctgcgtcggaccctcaagaagattcaggaaaag
atagatccgaatagcgtgaagcgctcatag
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