Atopobium sp. oral taxon 416: J4859_06710
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Entry
J4859_06710 CDS
T07170
Name
(GenBank) penicillin-binding protein 2
KO
K08384
stage V sporulation protein D (sporulation-specific penicillin-binding protein)
Organism
atb
Atopobium sp. oral taxon 416
Pathway
atb00550
Peptidoglycan biosynthesis
atb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
atb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
J4859_06710
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
atb01011
]
J4859_06710
Peptidoglycan biosynthesis and degradation proteins [BR:
atb01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
J4859_06710
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
QUC04904
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Position
1243814..1245499
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AA seq
561 aa
AA seq
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MALWAKRLGVDRRLVVLFTVLIVLCLCVVGRLVYLQILRGPALAEEASNNRTNEIVLPAK
RGTIYDRNGNVLAMSQAATTIYANPNQVSDKNQAAQILYDVLGGNKQDYLDILNQDTTFA
YVKRKVDPDQADQVREKLSDSDIAGIYYLDDSKRVYPYGALAGQILGMLGTDNEGLTGLE
LYYNDVLSGTDGSMTLETGADGTPIAGGISETNKATDGSDIVLSLDIDVQTVMENTLRNA
PKTYDSDSASAMVTNPKTGEILATCSTPFADLTDPDSLTNDELKLRMVSDIYEPGSIFKI
ITAASGFMNNTFTADTTYDVPVQIKVGDDYVTDSVKRNAMRMSVRTVMERSSNVGAILMA
RDVGAEQFSSTVKSLGLGQRTGIDYPGELAGDVADYDDYTSMTLSDMAFGQGLAVPQVQM
VQAVGAIANGGTLATPHFLIQKDGQDVTWAAKGQVCTPEVSQQISDLLQDVVAKGTAKQA
SVAGYKVAAKTGTAQMSSQDSGYAKGIYMSSLIGYANADDPDILVYVGLNGTPHFAESSS
SYMFSSIMSEALKDEGVPRAS
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atggcgctatgggcaaagcgcttgggggtggatcgacgtttagtcgtcctctttaccgtc
ttgatcgttttgtgcctctgtgtcgtggggagactagtctatctgcagatcttacgaggg
ccggcgctcgctgaagaagcctcaaacaaccggaccaacgagatcgtgctgcccgccaag
cgcgggacaatctacgatcgcaacgggaatgtgctcgcgatgagccaagcagccacgacg
atctatgccaatcccaaccaggtctccgataaaaaccaggctgcacagattctgtatgac
gtactgggtggcaacaagcaggactatctcgatatcctgaaccaggatacgacctttgcc
tatgtgaagcgcaaggtggatcctgaccaggctgaccaggtacgtgaaaagctgtcagac
agcgacatcgcgggtatctactacctggacgactccaagcgggtctacccgtatggcgct
ctcgcggggcagatcttaggcatgctcggcacagacaatgaggggcttacgggtctcgag
ctctactacaacgatgtgctctcaggcacggatgggtcaatgacgctggaaaccggtgcg
gacggaaccccgattgccggtggaatctccgagaccaacaaggccactgacgggtcggat
atcgtcctgtcactcgatatcgacgtgcagactgtgatggagaataccctgcgcaatgcc
ccgaagacctacgactccgactccgcttcggcgatggtgaccaaccccaagaccggggag
atcctggcgacctgctcgacgccctttgcagacctcaccgatccggatagtctcaccaac
gacgaactgaagctgaggatggtttcggatatctatgagccgggctcaatcttcaagatc
attaccgccgcctcaggctttatgaacaataccttcactgcggacactacctacgatgtc
ccggtgcagatcaaggtcggcgacgactacgtgaccgactccgtgaagcgcaatgcgatg
cggatgagcgtcaggaccgtgatggagcgctcctcaaacgtcggtgccatcctgatggcg
cgcgatgtgggggccgagcagttctcctcgacggtcaaatccttaggcctcgggcagcgc
accggcatcgactacccaggtgaacttgcgggcgatgtggctgactacgacgactatacg
tcgatgacgctgtcggacatggcattcgggcagggcctcgcagtcccgcaggtgcagatg
gtgcaggcggtcggcgcgatcgccaacggcggtacgctcgcgaccccgcacttcctaatc
caaaaagatgggcaggatgtgacctgggcagccaaggggcaggtgtgtaccccggaggtg
tcgcagcagatctcagatctgttgcaggacgtcgtggcgaagggcaccgccaagcaggcg
agcgtggcaggctacaaggtagccgccaagaccggtaccgcacagatgtcttcgcaggat
tctgggtatgcgaaaggaatctatatgagttcactgatcggctacgcgaacgccgatgat
ccggatatattggtttatgtgggcctcaacgggacgccacattttgcggaaagttcatcg
tcctatatgttctcgagtatcatgagtgaggcattaaaagatgagggagttccgcgagca
tcctag
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