Atopobium sp. oral taxon 416: J4859_07340
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Entry
J4859_07340 CDS
T07170
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
atb
Atopobium sp. oral taxon 416
Pathway
atb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
atb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
J4859_07340 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
atb03400
]
J4859_07340 (priA)
Enzymes [BR:
atb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
J4859_07340 (priA)
DNA repair and recombination proteins [BR:
atb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
J4859_07340 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
PriA_3primeBD
ResIII
PriA_C
Helicase_C
Zn_ribbon_PriA
Trm112p
Zn_Ribbon_TF
Zn_ribbon_19
HypA
AAA_30
PIF1
AAA_16
MoCF_biosynth
ATPase_2
Motif
Other DBs
NCBI-ProteinID:
QUC04718
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All DBs
Position
1373228..1375552
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AA seq
774 aa
AA seq
DB search
MIFVSVVVDIPTRALLAPFDYAVEDRLLTTEKVRQDPARYLIGMTVLVPFSRRRAVGYVM
DVHREPPEGLALNKIKSIDAILAPSAFDERSAQLAFWIAEKYACPVCEAVRLFLAPGQTV
KVKKVEDGSWELVQRSAGPLDVRWVGLTDQAVSFKPRPQASKQRGVLWALSDGAVRLVEL
NALLPGASQAVKTLEKYGVVRVWNRREFRSLETTTLSSARSVRPEHLTQGQQQALKAIQE
ACAAAQGDVVLLDGVTSSGKTEVYLEAIEQALREGKGAIVLVPEIALTAQTVGRFRSRFG
EQVALLHSRLSVGERFDQWDLVRQGKARVVVGARSALFAPVHNLGLVIIDEEHETSYKQD
SAPRYHAREVAAQLVKLNHAALVLGSATPSLESLTRCEQGTFNGVRWTRVPMPERPGRAT
LPEVHIVDMRQEFTSGHRSIFSKRLQDALLSTVEHHHKAVLLLNRRGFANFLMCRECGCV
PQCPHCNTALTYHERTHSLVCHSCGRSWPIRAYPDPTTRCPNCGSRYLAQFGVGTQRVED
ELKNLLPDTLIIRMDADTTKGKGDHRRLLEEFDAAPTAVLIGTQMIAKGLDFPEVTLVGV
INADTTLKLPDFRASERTYDLLEQVAGRAGRGEEAGQVIIQTYWATDPAIQAVKTHDRRS
YVASELEERREANYPPYTRLTNVLVWGKYKNQITQVINAIASEVRKKLSGRSGWYVLGPA
GCVKSKIQDRYRMHIIVKSPLDAEVGQLIAPIVNDLKKPRGVNVAIDVDAYDLM
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgatctttgtgagtgtcgtcgtcgatatccccacccgtgcgctcttagccccctttgac
tatgcagtggaggatcggctgctcacgaccgagaaggtgcggcaggatcctgcgcgctat
ctgattggcatgacagttctcgtaccgttctcaaggcggcgtgccgtgggctatgtgatg
gacgtacacagagaacctcctgaggggcttgccctcaacaagatcaaatcgatcgacgca
atcttggcgccctccgccttcgatgaaaggtccgctcaattagcgttctggattgcggaa
aagtatgcctgtccggtgtgtgaggcggttcgcctctttttggctccggggcagaccgta
aaagtgaagaaggtggaggatggttcgtgggagttggtccagcgctctgcggggccgctc
gatgtccgttgggtcgggctcaccgatcaggctgtctctttcaagccccgtccgcaggct
tccaagcagcgtggggtgctgtgggcactctctgacggcgcggtgcgcctcgtggagctc
aatgctcttctgccgggggcttcacaggccgtgaagaccttggaaaaatatggggtggta
cgggtttggaaccggcgtgagttcagaagcctcgagaccacgaccttaagctctgcacgc
tcggttagacctgagcatttgactcagggacagcagcaggcactgaaggcgattcaggaa
gcttgcgctgcagcccagggagatgtcgtgctgctcgacggagtcaccagctccggcaag
actgaggtatatcttgaggcgatcgaacaggccctcagggaaggcaaaggggcgattgta
ctcgtcccggagatcgcgctgaccgcgcagacggtggggcggttccgctcccgttttggg
gagcaggtggcactgttgcattcgcgcctctcggtcggtgagcgcttcgaccagtgggac
ctcgtgagacaggggaaggctcgggtcgtcgtgggcgcccgctctgcgctctttgctccg
gttcacaacctcgggcttgtaatcatcgacgaggagcatgagacttcctacaaacaggat
tcagcgcctcgctaccacgcgcgtgaggtggcggcgcagttggtcaagctcaaccatgcc
gcacttgtcttaggttcggcgacgccttcgctggagagcctcacccgctgtgagcaaggt
acgttcaatggcgtccgctggacgcgtgttccgatgcccgagcgtccgggcagggctacc
ttgcccgaggttcatattgtcgatatgcgccaggaattcaccagtggccatcgctcaatc
ttttcgaagcgtctgcaggatgcgctgctctcaacggtggagcaccaccacaaggcagtg
ctgctgttgaaccgccgcggctttgcgaacttcctgatgtgtcgggagtgcggctgcgtc
ccacagtgcccacactgcaatactgcgctgacctatcatgagcgcacccattcacttgtg
tgccacagctgtggaagaagctggcctatcagggcctatccggatcctacgacgcgatgt
cccaactgtgggagcaggtatctggcgcagttcggtgtaggaacccaacgggtggaggat
gagctcaagaacctgctgcctgataccttgatcatccgcatggatgcggatactaccaaa
ggcaagggagaccaccggcggctcctggaggaattcgatgcagcccctaccgcagtgctg
atcggtacccagatgattgcaaaggggctcgacttcccggaagtgacgctcgtcggtgta
atcaatgcggacacgacactgaagctgccggatttccgggcctctgagcggacctacgat
ctgctggaacaggtggcgggccgggcaggccgtggagaggaagccggtcaagtcattatc
caaacctactgggccacggatccggcgatccaggcggtcaagacccacgaccgcaggtcc
tatgtcgcctcagagctcgaggagcgcagagaggccaactatccgccctatactcgtctc
accaacgtccttgtgtgggggaagtataagaatcagatcacgcaggtgatcaacgcgatt
gcctcagaagtcagaaagaaactctctggccgatccggatggtatgtcctgggacccgcg
ggctgtgtgaagtcaaagatccaggaccgctaccgcatgcatatcattgtcaaatccccg
ctcgatgcggaggtgggacaattgatcgccccgattgtgaacgacctgaagaaaccccgt
ggggttaacgtggcgatcgatgtggacgcctatgacctgatgtag
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