Atopobium sp. oral taxon 416: J4859_07470
Help
Entry
J4859_07470 CDS
T07170
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
atb
Atopobium sp. oral taxon 416
Pathway
atb02024
Quorum sensing
atb03060
Protein export
atb03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
atb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
J4859_07470 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
J4859_07470 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
J4859_07470 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
atb02044
]
J4859_07470 (ffh)
Enzymes [BR:
atb01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
J4859_07470 (ffh)
Secretion system [BR:
atb02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
J4859_07470 (ffh)
Eukaryotic Sec-SRP protein
J4859_07470 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
AAA_22
CbiA
Zeta_toxin
nSTAND3
AAA_16
MMR_HSR1
AAA_33
Pox_A3L
AAA_30
AAA_18
AAA_19
NACHT
AAA_23
CpcD
AAA_5
AAA_24
APS_kinase
AAA_14
6PF2K
AAA_15
ABC_tran
DUF6300
AAA_17
Motif
Other DBs
NCBI-ProteinID:
QUC04743
LinkDB
All DBs
Position
1399795..1401252
Genome browser
AA seq
485 aa
AA seq
DB search
MFDSLSDRLQNTIDKLRGKGRLTEDDINVAMREIRMALLEADVNYKVVKDFVAKCKEKCL
TSEVLDSLTPSQNVVRIVLDQLTELLGTTESKLTLAPNRTPNVIMLVGLQGSGKTTAASK
LAYLLKGQEHKPLLAACDTHRPAAADQLETLGKEIGVPVYRGDGKDAVKVAKESIQYAVD
CMNDIVIVDTAGRLQIDEEMMQEAVNIRDAVRPDQILMVVDAMTGQDIVNVVQTFSERVN
FDGVIMSKLDGDARGGGALSVRAVTGKPIKFVSMGEKPDSLEVFHPDRMAKRILGMGDVI
GIIEQAEKTADEQSLEDAQRMLREGFTMDDMLTEMQQIRKMGGVKKIISSLPGGDKMLKQ
VGNIEDEKGLKKVESMIYSMTKEERARPKLINGQRRKRIAAGSGHTVQEVNQLLKQWSEM
NKMMGKMRQMSQNVGGGGKRHGKGKNRNNSKAQVRQLQAMMRQAQMGGMGGAPQGGNRAA
RRHRY
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgtttgactctctctcagaccgcctgcaaaacacgattgacaaattgcgtggcaagggc
aggctcaccgaagatgacatcaacgtcgcgatgcgtgagatccgcatggcgctgcttgag
gcggatgtcaactacaaggtcgtgaaggactttgtggcgaaatgcaaggagaagtgcctg
acctctgaggtcttggactccctcacaccctctcagaacgtcgtgagaatcgttctggat
caactgaccgagctcttaggtaccaccgagtctaagctcaccctggcgcccaacaggacc
ccgaatgtgatcatgctcgtgggccttcagggctccggtaagacgaccgccgcctcaaaa
ctggcttatctcttaaagggccaggagcataagccactgcttgcggcctgcgatacccac
agaccggcggcagctgaccagttggagacgctgggcaaggagatcggcgtgccggtctat
cgcggtgacggtaaggacgccgtgaaagtcgccaaggagtcgatccagtatgcggtcgac
tgtatgaacgatatcgtaatcgtcgataccgcaggacgtctgcagatcgacgaggagatg
atgcaggaggccgtcaacatccgcgacgcggtcaggccggatcagatcttgatggtcgtc
gatgcgatgaccggccaggacatcgtgaacgttgtacagaccttctcagagcgcgtcaac
ttcgacggcgtcatcatgtccaagcttgacggcgatgcccgtggcggcggcgcactgtcc
gtacgtgcggtcaccggcaagccgattaagttcgtctcgatgggcgagaagcctgattcg
cttgaggtcttccatccggaccgtatggctaagcgtatcctcggtatgggcgatgtgatt
ggtattatcgagcaggctgagaagactgctgacgagcagtccctggaagacgcgcagcgc
atgttacgtgagggcttcacgatggacgacatgctcaccgagatgcagcagatcaggaag
atgggtggcgtcaagaagataatcagttcactgccgggcggcgataagatgctcaagcag
gtgggcaacatcgaggatgagaagggactcaagaaagttgagtcaatgatttactcgatg
acaaaagaggagcgcgctcggcctaagctcatcaacgggcagaggaggaagcgcattgcg
gcaggctccggtcatacggtccaggaagtcaatcagcttctgaaacagtggagtgagatg
aacaagatgatgggcaagatgcgccagatgtcccagaacgtgggaggtggcggcaagcgc
catggcaaaggcaagaatcggaacaactccaaagcccaggtgcgtcaattgcaggcaatg
atgagacaggcgcagatgggcggcatgggtggagccccgcaaggcggcaaccgagcagct
cgtagacatcgctactaa
DBGET
integrated database retrieval system
