Atopobium sp. oral taxon 416: J4859_07900
Help
Entry
J4859_07900 CDS
T07170
Symbol
xseB
Name
(GenBank) exodeoxyribonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
atb
Atopobium sp. oral taxon 416
Pathway
atb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
atb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
J4859_07900 (xseB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
atb03400
]
J4859_07900 (xseB)
Enzymes [BR:
atb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
J4859_07900 (xseB)
DNA repair and recombination proteins [BR:
atb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
J4859_07900 (xseB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
MauJ
CCDC113_CCDC96_CC
DUF3496
DUF3952
AF0941-like
Motif
Other DBs
NCBI-ProteinID:
QUC04816
LinkDB
All DBs
Position
1483198..1483470
Genome browser
AA seq
90 aa
AA seq
DB search
MAEESEQKKIEDMSFKEASIELEKIVRSLESGDLELEDSLKCYERGVALIKSLRERLAHA
EQKVQVLLDDTKDEQAPDTTSAPSTAYLDE
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagaatcagagcagaaaaagattgaagacatgagcttcaaagaggcttctatc
gagctggagaagattgtccgttccctggagagtggagatctggagctcgaggattccctc
aagtgctacgagcgcggagtcgcgctgattaagagccttcgcgagcgcctggcgcacgca
gagcagaaggtacaggtgctcctcgacgatacgaaggatgagcaggcgccagataccacc
tcggcaccctctaccgcctatctggacgagtaa
DBGET
integrated database retrieval system
