Atopobium sp. oral taxon 416: J4859_07995
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Entry
J4859_07995 CDS
T07170
Name
(GenBank) class I tRNA ligase family protein
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
atb
Atopobium sp. oral taxon 416
Pathway
atb00450
Selenocompound metabolism
atb00970
Aminoacyl-tRNA biosynthesis
atb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
atb00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
J4859_07995
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
J4859_07995
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
atb01007
]
J4859_07995
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
atb03016
]
J4859_07995
Enzymes [BR:
atb01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
J4859_07995
Amino acid related enzymes [BR:
atb01007
]
Aminoacyl-tRNA synthetase
Class I (U)
J4859_07995
Transfer RNA biogenesis [BR:
atb03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
J4859_07995
Prokaryotic type
Other AARSs
J4859_07995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
Anticodon_1
tRNA-synt_1
Motif
Other DBs
NCBI-ProteinID:
QUC04832
LinkDB
All DBs
Position
complement(1500837..1502858)
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AA seq
673 aa
AA seq
DB search
MANNSNDTQVSFPKRVVITGGMPYGNKHLHFGHVGGMFVEADFFARFYRDRIGDENVIFV
SGTDCYGSPIMEGYRGRKEAGYTGSIEDYVEENHRSQAQTLKDYGISLDLFSGSGLEPAK
PFHAKLSREVIERLYQRGYLMKCSTKQFYDTKAHQFLNGRQVVGRCPVKGCKSEKAYADE
CDLGHQFDPEELITPVSQLTGTTPELRPVENWYFNLPAFADDLKKLVDKWDSDPQIRPLV
TKTVRESLEPPRIYIQEHYQETFDTIKDKLPPFKYFAPEGNQKSFSIVFNSWQERDDART
ILEDADIRFRTGKTLLPFRLTGNISWGVPAPDLEDLRGLTLWCWPESLWAPISFTQTLLA
TAATGRYSSTDWHDWWCSKDTKVFQFMGQDNINFYCVTQPALWEALDWGLIQDTPIADYH
ILFMNKKASSSGKIKPPMADDLLNHYTAEQLRTHWLSLALDQKAVSFSPKPYDTSVSHTD
KKTGEQILTKDDPRVADPVLKESAFLTNIFNRLARSCFYGATRALDNHLPSVDPEPEVVK
RCNKVTEDFEKACYYFNSTKALTIAEDFCREANKRWTKESKTAKEDPKGYEQALSNAFRA
LRTVTLLMHPVVPKGCEAIAEHLNIPTEVFFSWKHAEEGLPELVQYTGENVEQHEITPLP
PRFDFFERHESQR
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacaattcaaatgacacgcaggtttccttccccaagcgtgttgtgatcaccggc
ggcatgccctacggcaacaagcatctgcactttggccatgtcggcggaatgttcgtcgaa
gcggatttctttgcccggttctaccgtgaccgcatcggcgatgagaatgtgatctttgtc
tctggcaccgattgctacggctcccccattatggagggctatcgcgggcgcaaagaggca
ggctataccggcagcatcgaggactatgtagaggaaaaccacaggtcacaggcgcagacc
ttaaaggactacgggatctccctcgacctcttctccggctcagggctggagcctgcaaag
cccttccacgcaaagctctcccgtgaagtgatcgagcgcctttaccaacgcggctacctc
atgaagtgctccaccaagcagttctacgatacgaaagcccaccagttcctgaatggccgt
caggtcgtaggacgctgcccggtcaaaggctgcaagtctgagaaggcctatgcggatgag
tgcgatttgggtcaccagtttgacccggaggagcttatcacgccggtgagtcaactcact
ggcaccactcctgaactgaggccggtcgagaactggtactttaatctgcctgcctttgcc
gacgatctgaagaaattggtcgataagtgggatagtgacccgcagatccgtccgctcgtc
acgaagaccgtgcgcgagagcctcgagccaccccgcatctatatccaggagcactaccag
gagacttttgacacaatcaaggacaagctgccacccttcaagtactttgcccctgaaggg
aatcagaagtccttctcgatcgtgttcaactcctggcaggagcgtgacgacgcgcgcacc
atcctggaggatgccgatatccgcttccgtactggtaaaaccttgctccctttccgtctc
acaggcaacatctcctggggtgtccccgcacccgatctggaagatctgagagggctgacc
ctgtggtgctggccggaaagcctgtgggccccaatctccttcacgcagacgctgttggca
accgcagcgaccgggcgctacagctcaactgactggcacgactggtggtgctccaaggac
accaaggtcttccagtttatgggacaggacaacatcaacttctactgtgttacacagccg
gctctgtgggaggcgctcgactggggtctcattcaagacactccgattgcggactaccac
atcttatttatgaataagaaagcctcaagctctggcaagatcaagccgccgatggcagat
gatctgctcaaccactacaccgcggagcagcttcgcactcactggttgagcctcgcgctc
gaccaaaaggccgtgagtttcagcccgaagccctacgacacctccgtgagccacacggac
aagaagaccggcgagcagatcctgaccaaagatgacccacgcgtcgcggatccggtgctc
aaagaaagcgctttcctcacaaacatcttcaaccggctggcccgcagctgcttctacggc
gcaacgagagcgttggacaaccatctcccgtccgtggatcctgagcctgaagtcgtcaag
cgctgcaataaagtcactgaagactttgagaaagcctgctattacttcaattccacgaag
gcgctgaccatagcggaagacttctgccgtgaggccaacaagcgctggacgaaggaatca
aaaaccgccaaggaagacccgaaagggtatgaacaggccctctccaacgccttcagagca
ctcagaactgtgacccttcttatgcatccggtagtcccgaagggctgcgaagctatcgca
gagcacctcaacatccccacagaggtcttcttcagctggaagcacgccgaggaaggtcta
ccggagctcgttcagtacaccggtgagaatgtggagcagcacgagatcaccccactgccg
ccacgttttgacttcttcgagcgccacgaaagccaacgctag
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