Atopobium sp. oral taxon 416: J4859_08400
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Entry
J4859_08400 CDS
T07170
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
atb
Atopobium sp. oral taxon 416
Brite
KEGG Orthology (KO) [BR:
atb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
atb03016
]
J4859_08400 (truB)
Enzymes [BR:
atb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
J4859_08400 (truB)
Transfer RNA biogenesis [BR:
atb03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
J4859_08400 (truB)
Prokaryotic type
J4859_08400 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PseudoU_synth_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
QUC02083
LinkDB
All DBs
Position
1588740..1589666
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AA seq
308 aa
AA seq
DB search
MKREQNGLNLLLAVDKPGGISSHDVVNAVRRSLGERRVGHAGTLDPLASGLMIVGVGQAT
RLMGLITATTKTYIAQIKFGSATSTDDREGEVIRTARVPEVLNKTAFARQVLANLKGTHE
QVPPAYSAISVNGKRAYALAREGKQVELRPRTIEIIDAKLLSLEPDERGPFWDCLFTVSK
GTYIRSIARDLGESLNTAACLSGLRRTSVGPITLRDAHTLKDIEQAGALRIESFALDPVS
ALQIPAVELSDQQIEYLLQGKAPQIDTAVADGSRIAFAGKHKLWGVWECKGTSLKCVANF
MQGIVGVA
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
gtgaaacgggaacaaaatggattgaatcttctgcttgccgttgacaagccggggggcata
tcctcgcacgatgtggtgaatgccgtgcgcagaagcctgggggagcggcgtgtcggccat
gccggaacgttggatcctttagcctcgggccttatgatcgtgggcgtcggacaggcgacc
cgactgatgggcctgattaccgcaaccacaaagacctatatcgcgcagatcaagtttggc
agcgctacttcaaccgatgatcgggaaggtgaggttatccggactgctcgggtacctgag
gtactgaataaaactgcctttgcacgacaggtgttagcaaatcttaagggaacacacgaa
caggttccaccggcgtattccgccatctcagtcaacgggaagcgcgcctatgcgttggcc
cgcgaaggcaaacaggttgagctgagaccccgcacgatagagatcatcgatgcaaagctg
ctctcattggagcccgatgagagagggcccttttgggactgtctcttcacagtctcaaaa
gggacctatatccgcagcatcgcacgtgatctgggggagagcctcaacaccgcagcttgc
ctcagtggcctcagacgcacgtcagtcggtccaatcacgctgcgggatgctcacactttg
aaagatatcgaacaggcaggtgccctcagaatcgaaagcttcgccctcgacccggtcagc
gcactacagatacctgccgtggagctttcagaccaacagatcgagtatctgttacagggt
aaggcacctcagatagatactgctgttgctgacggtagccgtatcgcctttgccggaaag
cataagctgtggggcgtgtgggaatgcaaagggacttcattgaagtgtgtagcaaacttt
atgcagggaatcgtaggtgtggcatga
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