Atopobium sp. oral taxon 416: J4859_10420
Help
Entry
J4859_10420 CDS
T07170
Name
(GenBank) phenylalanine--tRNA ligase subunit beta
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
atb
Atopobium sp. oral taxon 416
Pathway
atb00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
atb00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
J4859_10420
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
atb01007
]
J4859_10420
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
atb03016
]
J4859_10420
Enzymes [BR:
atb01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
J4859_10420
Amino acid related enzymes [BR:
atb01007
]
Aminoacyl-tRNA synthetase
Class II (U)
J4859_10420
Transfer RNA biogenesis [BR:
atb03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
J4859_10420
Prokaryotic type
J4859_10420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
FDX-ACB
B5
tRNA_bind
Motif
Other DBs
NCBI-ProteinID:
QUC02458
LinkDB
All DBs
Position
complement(1992702..1995167)
Genome browser
AA seq
821 aa
AA seq
DB search
MRISYEWLSSMVDVPEDPEDLVKSYTHTGTEVEAVSRLGANLDHVVTGQVLTKERHPNSD
HMWITTIDVGEKNVDENGKPKPLQIVCGAQNFEAGDHVVVAMIGAHLPGDVHIKKAKLRG
TESFGMNCSECELGLGSDRSGIMILPKDAPVGVDFAEYYGIADTVIDCEITPNRPDCLSM
EGMAIETGAILDHDTHIEEPKIKREIAAKSSDLVDVTIDDPELCMRYTAHVVKNVKIGPS
PEWLARRVEAAGSRTINNVVDVTNYVMYLTGQPLHAFDLNKFKERDGKRHIVIRAAKDGE
HVTTLDHIDRKLTSDMIVITDDGKTPVALAGVMGGLNSEIDENTTDVLIESASFNAGHIS
RTSRNLDLMSEASIRYERQIDPNQCKRVSDIAAALFEECCGAEVCEGCIDEYPVPLEPAT
IALRVDRVNQLCGVTITPEFMQDKLTREGCTVTEKEPGKSFTVVAPTTRPDLTREADLIE
EILRMWGEDEVPATLPAARNHAGGLTTEQMRVRKIGSVLRACGLSETQTYCFADADDLKK
LNMSDGGRGVPVQIINPLVADQSQMRRSIIPGLLRSVAYNLSHGVDNVALYEIGHVFYGN
EHKSQPEEPRFVAGVLSGAWDDDQWNQKYPRLSFFDAKGVVEELLKVLRITKVRFKPADP
EKYSWLQPGRAAEVYAHGGDLLGWVGNIHPLSLKNFDVDQGVVAFELSLAALLRLAKREL
PYQEVPSLPGVSVDLAIVVDESITAEMLEQRIQSAGGKYLSDVRLFDVFRDPERLGAGKK
SMAFSLTYRAKDRTLTSEEVEKAHARLIKKVTRAVHGEVRS
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatatcatatgaatggctttcaagtatggtcgatgtgccagaagatccggaggac
ctggtcaaaagctatacccataccggcacagaggtagaggcggtcagtcgcttgggggcg
aacctggatcacgtcgtgaccggtcaggtcctcacgaaggagcgtcaccccaactctgac
cacatgtggatcaccaccatcgatgtgggggagaagaacgtcgacgagaacgggaaaccg
aagccgctgcagatcgtttgcggtgcacagaacttcgaggcgggcgaccatgtggtcgtc
gcaatgatcggggctcacttacccggtgacgtccacatcaagaaggcaaagcttagaggc
accgagtcgttcggtatgaactgctccgagtgtgagctgggcttaggttccgatcgctcc
ggcatcatgattctcccgaaggacgcgccagtgggcgtcgacttcgcagagtactacggg
atcgccgatactgtaatcgactgtgagatcaccccaaaccgcccggactgcctgtcaatg
gaaggcatggcaatcgagactggcgcgatcctcgaccacgacacacatatcgaagagcca
aagatcaaacgggagattgcagcgaagagctctgatctcgtcgatgtcacaattgacgat
cctgagctgtgcatgcgctacaccgctcatgtcgtgaagaatgtgaagatcggtccctcc
ccggagtggctcgcacgtcgtgttgaggctgcaggttcccgcacgatcaacaacgtggtc
gacgtgacgaactatgtgatgtatctgactgggcagccgctgcatgcctttgacctgaac
aagttcaaagagcgtgatggcaagcgccacatcgtaatccgtgctgccaaggatggcgag
cacgtgacgacgctcgaccacatcgaccgcaaactcacgagcgacatgatcgtaattacc
gacgacggaaagacaccggtcgcgcttgcgggtgtgatgggtggcctcaactctgagatc
gatgagaacacgaccgacgtcctgatcgagagcgcttccttcaatgcaggccacatctca
agaacgagccgtaacctcgatctgatgagtgaggcttcaatccgctacgagcgccagatc
gatccgaaccagtgcaagcgcgtttcagacatcgcagcagccctgttcgaggagtgctgt
ggggctgaggtttgtgagggctgcattgatgagtatccggtgccgcttgagccggcaacg
atcgccctacgtgtggaccgcgtcaaccagctatgcggcgtcacgatcactccggagttt
atgcaggacaagctgacccgcgagggctgcacggtcaccgaaaaggagcctggcaagagc
ttcaccgttgtcgctccgaccacccgtccagaccttacccgtgaggcggacctgatcgag
gaaatcctgcgtatgtggggcgaagatgaggtaccagcgaccctgccggcggcacgcaac
cacgcgggtggcctcaccaccgagcagatgcgcgtcagaaagattggttcggttctgcgc
gcctgtgggctctccgagacgcagacctactgcttcgcggatgcggacgacctgaagaag
ctcaatatgagcgatgggggccgtggagttccggttcagatcatcaacccgcttgtggca
gaccagagccagatgcgccgctccattatcccaggtctgctgcgcagcgtcgcttacaac
ctctcgcacggtgtcgacaacgtggcactctacgaaatcgggcacgtcttctacgggaat
gagcacaagtcacagcctgaggagccgcgcttcgtcgccggcgtgctttccggcgcctgg
gatgacgatcagtggaaccagaagtatccgagactctccttcttcgatgccaaaggcgtc
gtcgaagagctcttaaaggtgctgcgcatcacgaaggtgcgcttcaagccggcagatcct
gagaagtacagctggctgcagccgggccgtgccgctgaggtctatgcacatgggggagac
ctattgggctgggtcggcaacattcatccgctctccctcaagaacttcgatgttgatcag
ggcgtcgtcgcctttgagctctcattggcagcccttttgcgtctggcaaagcgtgagctt
ccgtaccaggaggtcccatcactgccgggcgtcagtgtcgacctggcgattgtggtggac
gagtcgatcactgcagagatgctcgagcagcgcattcagtctgccggcggcaagtatctg
agtgacgtgagactcttcgatgtctttcgggacccggagcgtttaggcgcgggcaagaag
agcatggcattctcactgacctatcgtgcaaaggatcgtaccctcacttcagaagaagtc
gagaaggcgcatgcgcgcctaatcaagaaggtcacgcgtgcggtccacggcgaagtgaga
agctaa
DBGET
integrated database retrieval system
