Atopobium sp. oral taxon 416: J4859_14130
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Entry
J4859_14130 CDS
T07170
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
atb
Atopobium sp. oral taxon 416
Pathway
atb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
atb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
J4859_14130 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atb03019
]
J4859_14130 (groL)
03110 Chaperones and folding catalysts [BR:
atb03110
]
J4859_14130 (groL)
03029 Mitochondrial biogenesis [BR:
atb03029
]
J4859_14130 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
atb04147
]
J4859_14130 (groL)
Enzymes [BR:
atb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
J4859_14130 (groL)
Messenger RNA biogenesis [BR:
atb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
J4859_14130 (groL)
Chaperones and folding catalysts [BR:
atb03110
]
Heat shock proteins
HSP60 / Chaperonin
J4859_14130 (groL)
Mitochondrial biogenesis [BR:
atb03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
J4859_14130 (groL)
Exosome [BR:
atb04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
J4859_14130 (groL)
Exosomal proteins of other body fluids (saliva and urine)
J4859_14130 (groL)
Exosomal proteins of breast cancer cells
J4859_14130 (groL)
Exosomal proteins of colorectal cancer cells
J4859_14130 (groL)
Exosomal proteins of bladder cancer cells
J4859_14130 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
KfrA_N
Motif
Other DBs
NCBI-ProteinID:
QUC03108
LinkDB
All DBs
Position
complement(2688724..2690364)
Genome browser
AA seq
546 aa
AA seq
DB search
MAAKDINFGADARAKLAKGVNTLADTVTTTLGPKGRYVALQRSYGAPTITNDGVSVAKEI
ELKDPIENMGAQLVKEVATKTNDLVGDGTTTATLLAQVMVNEGLRNVAAGANPIAIRRGV
DKAVAAVVDEMKKSAQPVNTKKQVAAVGTISAVSPEIGEKIADAMEIVGKDGVITVDESQ
TFGIDIDTVEGMQFDKGYISPYFATDQESMTTELQDPYILATDQKISNIQDIMPVLEAVS
KQGASLLIIAEDVDGEALATLILNKLRGTLHVAAVKAPGYGDRRKRMLEDIAVVTGGQVA
MKELGVNLSDVTAEMLGRAKTVKIDKDNTTIVGGAGSKDAINERIAQIKNEIENTTSDFD
KEKLQERLAKLSGGVADIKVGAATEAELKEIKHRIEDALQATRAAVDEGIVAGGGVAFLE
SAKALDDVKTVDADEKIGVEIVRKALEAPVKTIAQNAGYEGSVVVEKVKDMPAGSGLDSA
TGKWGDMIEMGVLDPVKVTRVTLQNAASIASLILITEATVTDVPKDTTIEEAISNAAAQG
GQGGAY
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaaaagatattaatttcggcgctgacgcacgtgctaagcttgccaagggcgta
aacaccctcgctgatacggtaaccaccaccttaggaccgaagggtcgttacgtggcatta
cagcgttcctatggtgctccgaccattacgaatgacggcgtgagtgtcgctaaggagatc
gagctcaaggacccgattgagaacatgggcgcccagctcgttaaggaagttgctaccaag
accaatgatctcgtcggtgatggtacgaccaccgcaaccctgcttgcacaggttatggtc
aatgagggactgcgcaacgtcgcagcaggtgccaacccgattgcaatccgtcgtggtgtg
gacaaggcagttgccgcggtcgtcgatgagatgaagaagtccgctcagccggtcaacacc
aaaaagcaggtggctgctgtcggcaccatttccgcagtgagccctgagatcggtgagaag
attgctgacgcaatggagatcgtcggtaaggacggcgttatcaccgtcgacgagtcccag
acatttgggattgatatcgacaccgtcgaaggtatgcagttcgacaagggctacatctcc
ccgtacttcgcaactgatcaggagagcatgaccactgagctgcaggatccctatatcctg
gccactgaccagaagatctccaacatccaggatatcatgccggtgctcgaggcagtctcc
aagcagggcgcatcgctgctcatcattgccgaggacgtcgacggcgaggctctagcgacc
ctgattctgaacaaacttcgtggcaccctgcatgtcgcagctgtcaaggctccgggttac
ggcgatcgtcgtaagcgtatgctcgaggatatcgctgttgtcaccggtggccaggtggct
atgaaggagctcggcgtcaacctctccgatgtcaccgctgagatgctcggccgtgctaag
accgtcaagatcgacaaggacaacaccacgattgtcggtggtgcaggctccaaggatgct
atcaacgagcgcatcgcccagatcaagaatgagatcgagaacacgacctctgacttcgat
aaggagaagctgcaggagcgtttggctaagctctccggcggtgtcgcagacatcaaggtc
ggtgcagcaaccgaggctgagctgaaggagattaagcaccgcatcgaggacgcactgcaa
gctacacgtgcagctgtcgatgagggcatcgtcgcaggcggcggcgtcgcattcctcgag
agcgcaaaggctttggacgacgttaagaccgtcgacgcggacgagaagattggtgtcgaa
attgtccgtaaggcacttgaggctccggtcaagactatcgcacagaacgccggctatgag
ggctccgtcgtcgttgagaaggtcaaggatatgcctgcaggctctggccttgactccgca
accggcaagtggggcgacatgatcgagatgggtgttctggatcctgtgaaggtcacccgt
gttaccctgcagaacgcagcctccatcgcttctctgatcctgatcactgaggctacggtc
accgatgttcctaaggataccacgattgaggaagctatctccaacgcggctgcccaaggc
ggacaaggcggcgcctactaa
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