Atopobium sp. oral taxon 416: J4859_14470
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Entry
J4859_14470 CDS
T07170
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K02647
carbohydrate diacid regulator
Organism
atb
Atopobium sp. oral taxon 416
Brite
KEGG Orthology (KO) [BR:
atb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
atb03000
]
J4859_14470
Transcription factors [BR:
atb03000
]
Prokaryotic type
Helix-turn-helix
Other families
J4859_14470
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Diacid_rec
HTH_30
GGDEF_2
LpxB
TAF4
YchF-GTPase_C
Motif
Other DBs
NCBI-ProteinID:
QUC03169
LinkDB
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Position
2756323..2757438
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AA seq
371 aa
AA seq
DB search
MNLDPKIAKSIVTSLKDVVNHEINLFDTTGRVVASTDASRVGTTHDAARLAAKTSQTVAV
DDSDQFKGAKHGINVPVLFNGAVVAVVGMTGELDEVSSFGTIIGRMTEILIRENHDQVVR
FDAMERFSNLVNLLVLKHHDHSLVDYLASVLNIDFSIPRKAVVGRRADNERMDKIGDVYP
ILYARLSQEPGCFFSTTEKEVRIFANREGSKLSTFVRNIHKDLENHLDAEFYFGVGDTAM
SEEEYWRSYERASRALSWSLFKHEGNVRFFESMDEGIVFTAIPKDESASFVNHVFGDLSD
KEIDDFQVVFDSYARHNGSITHSADELFLHKNTLQNRLNKIARMTGYNPRDLSDYAVLSM
AFKLRSYLRQR
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgaacttagaccccaaaatcgcaaagagcatcgtgaccagcctgaaggacgtggtcaac
cacgagattaacctctttgacacgacgggacgcgtggtggccagcaccgatgcctcacgc
gtcggtaccacgcacgatgcggccaggcttgccgcaaagaccagccaaacggtagcagtt
gacgacagcgaccagttcaagggtgccaagcatggaatcaacgtgcccgtattgttcaac
ggagccgttgtggcagtcgttggaatgaccggcgagctggacgaggtcagctcctttggc
accatcatcggaaggatgacagaaatactcattcgtgagaaccacgatcaggtggtccga
ttcgacgcaatggagcgcttctcaaaccttgtgaacctgctggttctaaagcaccacgat
cacagtctcgtagactaccttgcctcggtgctgaacatcgacttttcgattcctcgcaaa
gccgttgtgggaagacgtgccgacaacgagcggatggacaaaattggcgacgtctacccc
atcctctacgcgcggttatcccaggaacccggctgcttcttctccacaaccgaaaaggag
gtgagaatattcgccaacagggagggaagcaagctctccacctttgttcgtaacatccat
aaggacctcgagaaccatctggacgcggaattctatttcggcgtaggcgacactgcgatg
tccgaggaagagtattggagaagctacgagagggccagcagggcattgagttggtcgctg
ttcaagcatgaggggaacgtccggttttttgagagcatggacgagggcatcgtctttacg
gccatcccaaaggacgagtccgccagcttcgtgaatcacgtgttcggagatctctccgac
aaagaaatcgatgacttccaagtggtgttcgattcgtacgcccgacacaacggaagcatt
acccacagcgcagacgagctctttctgcacaagaacacgctccagaacaggctgaacaag
attgcacgcatgaccggttataacccccgagacctgtcagactacgctgtgctctccatg
gcgttcaaactcaggagctatctacgccaaagataa
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