Atopobium sp. oral taxon 416: J4859_15340
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Entry
J4859_15340 CDS
T07170
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
atb
Atopobium sp. oral taxon 416
Pathway
atb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
atb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
J4859_15340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
atb03400
]
J4859_15340
Enzymes [BR:
atb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
J4859_15340
DNA repair and recombination proteins [BR:
atb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
J4859_15340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
QUC03322
LinkDB
All DBs
Position
complement(2919029..2919931)
Genome browser
AA seq
300 aa
AA seq
DB search
MGDIVVGCHLSTSKGYEAMGKCALEIGANTFAFFTRNPRGGKGKVPDSADVQALLDLMER
HQFGKLVAHAPYTMNLCSAKPDVVEYTRQAFASDIERMEELPGNYLNFHPGNHLKQGADE
GIRLIVEGLNQVLVPGQKTMVLLETMAGKGTEVGRTFEEIERILEGVEHDELMGVCLDTC
HVNDAGYPIAEDLDGVLDEFDHVIGLERLKALHLNDSKNPLASHKDRHERLGQGTLGLAV
FQKIVTNPRTSGLPMILETPNELSGYRREISALRALARGASLEEAEALLKAADDKAQKKA
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgggcgacatcgtggtaggctgtcatctctcgacgtcgaagggctatgaggcgatgggg
aagtgcgcgctcgagatcggcgcgaacacgtttgctttctttacaaggaatccccggggt
ggcaagggcaaggtgccagattctgccgatgtgcaggcgctccttgatcttatggagcgc
caccagttcggcaagctcgtggcacatgctccctatacgatgaatctgtgctctgcgaag
ccagatgtcgtggagtatacgcggcaagccttcgcatccgatatcgagcgcatggaagag
ctgcccggcaactacctcaattttcatccgggcaaccatctgaagcagggggcagacgaa
ggaatccgactcattgtcgaaggactcaaccaggtactcgtgcctggccagaagaccatg
gtgctgctcgagaccatggcaggaaaggggaccgaagtgggccgcacattcgaggagatc
gagcgtatcctcgagggcgttgaacacgacgagctcatgggcgtctgcctcgacacctgc
cacgtgaacgatgcgggctatccgatagcagaggaccttgacggcgtgctcgacgagttc
gatcacgtgatcggcctcgagcgcttgaaggcactgcatctgaacgattcgaagaatccc
cttgcttcccacaaggatcgccatgaaaggctcggccagggcacactcggccttgctgtc
ttccagaagatcgtgacgaacccacgtacgagcggccttccgatgatactggagacaccg
aacgagctttccggttaccggcgcgagatctcggcgctgcgggcacttgcacggggagct
tcgctcgaggaagccgaagcgctgctcaaagctgctgatgacaaggctcagaagaaggca
tag
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integrated database retrieval system
