KEGG   Aethina tumida (small hive beetle): 109593871
Entry
109593871         CDS       T06105                                 
Name
(RefSeq) collagen alpha-1(I) chain-like
  KO
K19719  collagen type II alpha
Organism
atd  Aethina tumida (small hive beetle)
Pathway
atd04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:atd00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    109593871
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:atd00536]
    109593871
Glycosaminoglycan binding proteins [BR:atd00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   109593871
SSDB
Motif
Pfam: Collagen COLFI VWC TILa PSP94
Other DBs
NCBI-GeneID: 109593871
NCBI-ProteinID: XP_019864560
LinkDB
Position
3:join(19145594..19145807,19145882..19146193,19146249..19146619,19146674..19146979,19147115..19147223,19147285..19147472,19147527..19147994,19148097..19148258,19148486..19148683,19148739..19148892,19148977..19149362,19149490..19149742,19149795..19150027,19150080..19150476,19150534..19150830,19150888..19151060,19151115..19151333,19151395..19151541)
AA seq 1528 aa
MHYNKVLWVALIALTFLGTTAEARTRRSKLKKQRPQADTPEGGIQNQQPEGDDYPTDYEY
NEYTEYDDNRRPGGSITTPQPPDERPDTTEIYVQPDDELPTPEPTANIDLHIIPPTPAPS
CRQDGRIYQDKEKWRVGECSNCTCVRGKIQCKTDDECLRATAPVIPPAYETIPIPGERGQ
TGYPGEAGRPGEAGLPGTPGNPGIPGPPGPPGPAPDLSAYYQQLALSQASGDKGPSFPEP
FQYLQAQTGPVGARGPPGPPGPPGPQGFQGSRGDTGEPGQPGPPGPVGPRGLPGPQGKDG
QHGEDGEMGQPGAAGPPGPRGLPGMPGLPGVKGHRGFQGLDGAKGEQGAQGEKGSQGSPG
PMGPIGPVGPAGPRGERGREGPPGPPGLRGLDGIAGPPGLPGAIGKPGPPGFPGSPGAKG
DQGSQGPKGSQGLQGPRGESGRPGQPGESGPPGPPGKDGYPGEKGNIGSPGISGPPGFPG
ARGPPGLAGSPGQPGAKGNIGAPGERGYKGESGIKGEAGAPGPRGLPGVAGPEGKRGKRG
MRGPAGAQGPQGERGLPGVTGLPGPDGAPGPKGQSGDRGPVGPSGPKGSQGEPGRPGQTG
LQGLRGLTGRPGLPGKPGGPGERGLPGADGKPGEPGPQGLQGLPGPMGIQGDKGLTGEAG
KDGEPGPPGAQGPRGDAGKDGQPGPQGPPGPPGSDGERGAPGVAGPRGFQGLPGAQGNPG
APGKDGEPGVQGPPGIAGNPGPRGERGLPGERGLQGLTGLTGVKGATGEQGPDGPPGPQG
LRGPKGHSGPPGLVGLPGLRGQPGPQGEKGERGSYGPMGPEGPPGRQGERGLQGPMGPPG
PPGEPAERGEQGPPGSPGEPGAPGSPGERGQVGPQGLQGFPGPQGLVGLPGIKGERGLTG
MKGQQGNPGAIGRPGPQGPQGPIGLTGAKGARGEAGPRGDAGLMGPPGRPGEPGVAGQPG
STGLPGPQGLPGIKGAQGDTGRVGLPGPQGHPGLPGPEGAKGERGSEGSPGPIGQPGPIG
PPGDRGLPGLPGPPGPTGLRGLRGAVGETGAPGKPGPEGKAGPPGFTGPPGPPGPSGDQG
PEGPSGKPGPPGISGRPGDKGPQGSPGQPGNPGTPGLPGPPGPIGPVGMTGERGPRGEPG
PQGVIGVPGERGKQGIQGLEGAKGERGAEGMKGSKGHRGLMGLQGLPGIQGPPGEKGPMG
FQGLPGKDGEPGPRGPPGRDGSPGPQGIQGNPGPRGETGNDGHSGPPGPPGPPGPPGPPG
DGLGYDAASLAALLSHSQINNQKGPDSLGDQPARIFGKELTEEETREIVLKAYEQLKTSF
EKFKKPNGEKKTPGKTCRDILAAYPESQSGQYWVDPNEGDPRDAILVHCDMEKKATCIMP
KPTRSEEITYMGHDQEIWLGEIDKGVKINYKADSTQIGFLHLLSSKAQQNVTYHCRNSVA
YFDVTKHTFRRGLKLMSWNDIEITPKGNKLRYEAITDDCKYRQGTWAESILTYITDKPQR
LPITDIAVRDFSDPNHAFWVEIGPVCFY
NT seq 4587 nt   +upstreamnt  +downstreamnt
atgcattataataaagtcctgtgggtggcgcttattgcgctcaccttcttggggacaacg
gctgaagcccgtaccagaagaagcaaattgaaaaagcagagacctcaagctgacacacct
gaagggggcatacaaaaccaacaacctgaaggtgatgattatccaacggattatgaatac
aatgaatacactgaatacgacgacaacagaagacctggtggatccattacaacaccacag
ccaccagatgaaagaccagacacaacagaaatatatgttcagccagatgacgaattacct
actccagaacctacggctaacattgatcttcatattattcctcccacaccagccccaagc
tgtagacaagatggaagaatatatcaggacaaagaaaaatggagagtaggagagtgctca
aattgcacctgtgtcaggggtaaaattcaatgcaaaaccgacgatgaatgtctaagagcc
acagcaccagtaataccgcccgcatatgaaactattcccattcctggagagcgtggacaa
actggctacccaggtgaagcaggacgcccaggagaggcaggtttacctggtacccccgga
aatcccggcattcccggccctccaggaccaccaggaccagctcctgatttatctgcttat
tatcagcaattagctttatcgcaagctagtggcgataaaggaccttcatttccggaaccg
ttccaatatttgcaggcccagactggaccagttggtgcccgtgggccacctggccccccc
ggaccacccggccctcaaggttttcaaggatcccgtggtgacaccggagaacccggacag
ccaggtcccccaggtcctgtaggacccagaggacttccgggaccacaaggaaaagatgga
caacatggtgaagacggagaaatgggtcaaccaggggctgctggacctccaggtcctaga
ggtttgccaggaatgccaggtttaccaggtgtaaaaggacatagaggtttccaagggttg
gacggagctaagggagaacaaggtgcacagggtgaaaaaggatcgcaaggtagtccagga
ccaatggggccaattggtccagttggacctgcaggaccacgaggagaaagaggcagagaa
ggaccccctggtcccccaggattaagaggattggatggaattgctggaccacctggatta
ccaggagcaattggaaaacccggacctccaggttttcccggaagccccggtgctaaagga
gatcagggttctcaaggccccaaaggtagtcaaggattgcaaggaccaagaggtgaaagt
ggaaggcccggacaaccaggagaatctggaccccctggcccaccaggaaaagatggatat
ccaggagaaaaaggaaacattggatcaccaggaatttcgggccctcccggtttccctggt
gctagaggaccacctggtttggcaggaagtcctggacaaccaggagctaaaggaaatatt
ggcgctccaggagaacgtggttataaaggagaaagtggtatcaagggagaagctggtgcc
ccaggtcccagaggtttgcctggtgtagctggacctgaaggaaaacgaggcaagagaggt
atgaggggacctgctggtgctcaaggaccgcaaggagaacgaggattaccaggtgtgact
ggattaccgggtcctgatggtgctcctggtccaaagggacagtctggtgatagaggtccg
gtaggcccaagtggaccaaaaggttctcaaggagaacctggtagaccgggacagactggg
ctgcaaggactgcgaggtctaaccgggcgaccaggcctaccaggaaaacccggtggtcca
ggagaaagaggattacctggggctgatggaaaacctggtgagcccggtccacaaggatta
caaggtcttcccggtcctatgggtattcagggagacaaaggtttaacaggcgaagcagga
aaggatggagaacctggtcctccaggcgcacaaggtcctagaggagatgccggtaaagat
ggacaacctggccctcaaggaccacctgggccaccgggatctgatggagaaaggggagca
ccaggcgtagccggacctagaggattccaaggactgccaggagcacaaggaaatcctggt
gcaccaggaaaagacggtgaaccaggtgtacaaggcccacctggtatagcaggaaatcct
ggacctagaggagaacgtggtcttcctggagaacgtggtcttcaaggattgaccggttta
acaggagtaaaaggagcaacaggtgaacaaggacctgatgggccaccaggacctcaaggt
ttgagaggacctaaaggtcacagtggaccaccaggtttagtaggtcttcctgggctgaga
ggacaacctggaccacaaggtgaaaaaggtgaacgaggatcttacggcccaatgggtcca
gaagggccaccgggaaggcaaggggagaggggtcttcaggggccaatgggccctccaggt
ccacctggcgaaccagctgagagaggcgaacaaggaccgccaggttctccaggagaacca
ggagcacctggaagtccaggagaacgtggtcaagtaggccctcaaggtctgcaaggtttt
cccggcccacaaggccttgtaggattacctggtatcaaaggagaacggggattaactgga
atgaaaggtcaacaaggaaatccaggagcaattggccgaccaggtcctcaaggacctcaa
ggccctatcggtcttactggagctaaaggcgccagaggtgaagctggacctagaggtgat
gctggattaatgggtccaccgggaaggccaggagaaccaggagttgcgggacaacctgga
agtaccggactaccaggtccgcaaggtttaccaggaattaagggggcgcaaggagatact
ggcagagtaggattaccaggtcctcaaggacatccaggattacctggacctgaaggtgca
aaaggtgaacgcggttctgaaggatcaccgggacctattggtcaacccggcccaattgga
ccacctggtgatagaggattacctggtttgcctggcccaccaggaccaactggacttaga
ggattgagaggagctgtcggagagactggagctccaggaaaaccaggacctgaaggaaag
gcaggtccacctggatttaccggtcctccaggaccaccaggcccgagtggtgatcaagga
ccagaaggaccttctggaaaacctggaccaccaggtatttcaggaagaccaggagataaa
ggacctcagggatccccaggtcaaccaggaaatccgggaactccaggattaccgggacca
ccaggaccaattggaccagtaggaatgactggagaacgtggacctaggggtgaacctgga
ccacaaggtgttataggagtgcctggagaacgcggtaaacaaggtatccaaggtttggaa
ggagctaaaggagaacgtggagctgaaggaatgaagggttccaagggacatcgtggttta
atgggattacaaggtttgcctggtatccagggtcctcctggcgagaaaggaccaatggga
ttccaaggattacctggcaaagatggagagccagggccaagaggaccacctggaagagat
ggaagtccaggacctcagggtattcagggtaatccaggaccacgcggagagacaggaaac
gatggacattctggaccacctggacctccaggacctcctggccctcctggaccacctgga
gatggacttggttatgacgctgctagtttggctgctttattatctcacagtcaaattaac
aaccaaaagggacctgattctttgggagatcaacctgctagaatctttggaaaggaactt
accgaagaagaaactagagaaattgtacttaaggcttacgagcaactgaaaacaagcttt
gaaaagttcaaaaaaccaaatggtgaaaagaaaacaccaggaaagacctgtagagatatt
cttgctgcttatccagaatctcagagcggtcaatactgggtagatccaaatgaaggagat
cccagggatgccatcttggtacattgtgacatggaaaagaaagcaacttgtattatgcca
aaaccaactagatctgaagaaatcacatacatgggtcacgatcaggaaatatggttagga
gaaatcgataaaggagttaagatcaattacaaagcagacagcactcaaattggattcctt
catttgttgtcttcaaaggcccaacaaaatgttacataccactgcagaaattctgtagct
tactttgatgttacgaaacacactttcagaagaggtttgaaattgatgagttggaatgat
attgaaataacccctaaaggaaataaacttagatacgaagctattactgatgattgcaag
tatcgtcaaggaacgtgggctgaatcaatcttaacctacatcaccgataagcctcaaaga
ttgcccatcactgatattgctgtaagagacttcagtgatcctaaccatgccttctgggtg
gaaataggacctgtgtgcttctattag

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