Aethina tumida (small hive beetle): 109594514
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Entry
109594514 CDS
T06105
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
atd
Aethina tumida (small hive beetle)
Pathway
atd03020
RNA polymerase
atd03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
atd00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
109594514
09124 Replication and repair
03420 Nucleotide excision repair
109594514
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
atd03021
]
109594514
03400 DNA repair and recombination proteins [BR:
atd03400
]
109594514
Enzymes [BR:
atd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
109594514
Transcription machinery [BR:
atd03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
109594514
DNA repair and recombination proteins [BR:
atd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
109594514
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
109594514
NCBI-ProteinID:
XP_019865294
LinkDB
All DBs
Position
5:join(22914900..22914918,22914980..22916057,22916146..22916265,22916321..22916822,22916879..22917337,22917394..22917855,22917914..22918132,22918190..22918858)
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AA seq
1175 aa
AA seq
DB search
MYDQEEEQYEEDDSEEISSELWQEACWIVINAYFDEKGLVRQQLDSFDEFIQMSVQRIVE
DSPQIDLVAEAQHTSGELENPPRYLLKFEQIYLSKPTHWEKDGAPSPMMPNEARLRNLTY
SAPLYVDITKTIVKENEDPIETQHQKTFIGKIPIMLRSTYCLLSGLTDRDLTELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFSMKDGKYAYKSEIRSCLEHSSRPTSTLWVNMM
ARGGQAVKKAAIGQRIIAILPYIKQEIPIMIVFRALGFVADRDILEHIIYDFDDPEMMEM
VKPSLDEAFVIQEQGVALNFIGSRGARPGVTREKRVKYAREILQKEMLPHVGVSDFCETK
KAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFKNLMKEVRIYAQ
KFIDRGKDFNLDLAIKTKLITDGLRYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLS
HLRRVNSPIGRDGKLAKPRQLHNTLWGMICPAETPEGAAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEIAPSAIANATKIFVNGCWVGIHRDPEQLTATLRKLRRQMDIIVSE
VSMIRDIRDREIRIYTDAGRICRPLLIVENGGLLLKKEHIDMLKEREYNNYGWQVLVASG
VVEYIDTLEEETVMIAMSPDDLRQEKEYAYCTTYTHCEIHPAMILGVCASIIPFPDHNQS
PRNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPHKPLVTTRSMEYLRFRELPAGINSI
VAIACYTGYNQEDSVILNASAVERGFFRSVFYRSYKDAESKRIGDQEEQFEKPTRQTCQG
MRNALYDKLDDDGIISPGIRVSGDDVVIGKTMTLPENDDELDGTTKKFTKRDASTFLRNS
ETGVVDQVMLTLNSEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMIFSCE
GITPDIIINPHAIPSRMTIGHLIECIQGKVSSNKGEIGDATPFNDAVNVQKISTLLQEYG
YQLRGNEVMYNGHTGRKLNAQIFLGPTYYQRLKHMVDDKIHSRARGPVQILVRQPMEGRA
RDGGLRFGEMERDCQISHGAAQFLRERLFEVSDPYRIHVCNFCGLIAIANLRNNTFECKG
CKNKTQISQVKLPYAAKLLFQELMSMNIAPRLMVL
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atgtatgaccaggaagaggaacaatatgaagaggacgattccgaggaaattagttcagaa
ctatggcaagaagcttgctggatcgttattaacgcatatttcgacgaaaaaggccttgta
cggcaacaacttgacagttttgatgaattcattcagatgtctgtacagagaattgtggag
gattcacctcagattgatttagtggcagaggcacagcacacttctggagaattagagaac
ccacccagatatttgttaaagtttgaacagatttatttatccaaaccaacccattgggaa
aaagatggtgcaccctcacctatgatgcctaatgaagcaagattgcgtaatctcacatat
tcagctcctttgtatgttgatatcaccaagacaattgtaaaagaaaatgaagacccaatt
gagacacaacatcaaaaaacgtttattgggaaaattcccattatgttaaggtctacttat
tgtttactcagtggtctaacagatcgtgatttaacagaattgaatgagtgccctttggat
ccagggggctattttattattaacggatcagagaaagtacttattgcccaggaaaaaatg
gcaactaacactgtatatgtattctcaatgaaagatggaaagtatgcatacaagtctgaa
attcgatcatgtctggaacacagttccagacccacatccaccctgtgggtaaatatgatg
gctagaggtggtcaggctgtgaagaaagctgcaattggtcaaagaatcattgctatttta
ccatatattaaacaagaaatccctattatgattgtattcagagctttgggttttgtggct
gatcgtgatattctagaacatatcatttatgactttgatgatccagagatgatggaaatg
gtcaagccctcactagatgaggcttttgttatccaagaacagggtgtagctttgaacttt
attggttcaagaggtgctaggcctggtgttaccagagaaaagagagtgaaatatgccaga
gaaattttacagaaggaaatgttgccacatgtcggcgtttctgatttttgtgaaacaaag
aaagcttatttcttgggctacatggtacacaggttacttctcgccgccctaggtcgtcga
gaactggacgacagagatcactacggcaacaaacgtctggatttagctggtccattattg
gcttttctattcagaggattgttcaaaaatttgatgaaagaagtccgtatctacgctcaa
aagttcatcgatcgtggaaaagatttcaatctagacctggccatcaaaacgaagctgatc
acagacggcctgcgttactctttggccactggaaactggggcgaccagaagaaggctcat
caagccagagctggagtgtctcaagtattgaacagattgacattcgcctcaactttgtct
catttgaggcgtgtaaactccccgattggtcgtgacggcaaactggccaaaccccgtcaa
ttgcacaacaccctgtggggtatgatttgcccggccgaaacaccagaaggtgccgccgta
ggtctggtaaagaaccttgctcttatggcctacatttcggtcggatcccagccatcgcct
atattggagttcttggaggagtggtccatggaaaatctggaagaaattgccccctccgca
atcgctaacgctacaaagattttcgtcaatggatgctgggtcggaatccacagagatcca
gaacagttgacggccactctaagaaaattgcgtcgtcagatggacatcattgtgtcagaa
gtatctatgattcgagacatccgtgatagagaaatcagaatttatacagacgcaggtcgt
atttgcagacctttgctcattgttgaaaatggtggtttgctgttgaaaaaagaacacata
gatatgttaaaggaaagagaatacaataactatgggtggcaagtattggtagcgtccgga
gtcgtcgagtacatcgacaccctggaagaagagactgtgatgatcgccatgtctcccgat
gatttgaggcaggagaaagagtacgcatactgtaccacatacactcattgcgaaattcat
cccgccatgattttgggcgtgtgcgcctctatcattccattccccgaccacaaccaaagt
cccaggaacacttatcaaagtgctatgggtaagcaagctatgggagtgtacattacgaac
ttccacgtgcggatggacaccctggcccacgtgttgtattacccccacaaacccctggtc
acaaccagatccatggagtacttgcggttcagagagttgcctgcgggcattaacagtatt
gtagctattgcctgttacacagggtacaaccaagaagattcagtcatcttgaacgcctcc
gctgtcgagcgaggcttcttcagatccgtgttttaccgttcctacaaagatgctgagtcc
aaacgtattggtgaccaggaggagcagtttgagaagccaacaagacagacatgtcaaggc
atgagaaacgcgctttatgacaaattggacgacgatggtattatctcgccaggtattcgt
gtatcaggtgatgatgtggttattggaaagaccatgactctgcctgagaacgatgatgag
ttggatggtacaacaaagaaattcacaaaacgtgacgcatctacgttcttgcgtaacagt
gaaactggcgtcgttgatcaggtaatgttgacgctgaattcagaaggctacaagttctgc
aagatccgtgtaagatcagtaagaataccacaaattggtgacaaattcgcttctcgtcac
ggacaaaagggtacatgtggaattcaatacagacaagaggatatgattttctcatgcgaa
ggcatcacccccgacattatcattaacccccacgctatcccatctcgtatgacaatcggt
cacttgatcgagtgcatccaagggaaagtatcttcgaacaagggcgaaatcggtgacgcc
acaccctttaacgacgctgtaaacgtacagaaaatctcaacacttttacaagaatacggc
tatcaactgagaggcaacgaagtaatgtacaacggtcatacaggcaggaaattgaacgcc
caaattttcttgggacccacctattaccagcgtttgaagcacatggtggacgacaaaatc
cactctagggcccgtggcccggtgcaaattctcgtaagacaacctatggaaggtcgtgcc
agagatggaggtcttcgttttggtgagatggaacgtgattgtcaaatatcacacggagcc
gctcaatttttaagagaaaggctgttcgaagtttccgacccgtataggatacacgtgtgt
aatttctgcggtttaattgcgatagccaatttaaggaacaatacattcgaatgtaaggga
tgcaagaacaagacgcaaatatcgcaggtcaagttgccgtatgcggcgaaattgctcttc
caagagctaatgtccatgaacatcgcacccaggttgatggttttgtaa
DBGET
integrated database retrieval system
