Aethina tumida (small hive beetle): 109594734
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Entry
109594734 CDS
T06105
Name
(RefSeq) cysteine--tRNA ligase, cytoplasmic
KO
K01883
cysteinyl-tRNA synthetase [EC:
6.1.1.16
]
Organism
atd
Aethina tumida (small hive beetle)
Pathway
atd00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
atd00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
109594734
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
atd01007
]
109594734
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
atd03016
]
109594734
Enzymes [BR:
atd01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.16 cysteine---tRNA ligase
109594734
Amino acid related enzymes [BR:
atd01007
]
Aminoacyl-tRNA synthetase
Class I (G)
109594734
Transfer RNA biogenesis [BR:
atd03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
109594734
Prokaryotic type
109594734
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1e
tRNA-synt_1g
tRNA-synt_1
DUF1657
DUF2524
Anticodon_3
Calmod_bind_C
DUF445
Motif
Other DBs
NCBI-GeneID:
109594734
NCBI-ProteinID:
XP_019865530
LinkDB
All DBs
Position
3:join(12027061..12027236,12027295..12027481,12027533..12027612,12027666..12027882,12027939..12028149,12028281..12029101,12029154..12029316,12029374..12029585,12029645..12029764)
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AA seq
728 aa
AA seq
DB search
MSKRVQPEWVLPAPNGPQLKVFNSLTRQKEVFVPLAGKRVTWYSCGPTVYDASHMGHARS
YITFDILRRVLTDYFGYDVFFVMNITDIDDKIIKRARQNYLFEKYVAENKSLEDILTDSK
QVLQKLSSTTKNTTDPDKKQMYEKLLMRLEKAIEDLEKAVKSGNRKLETEAKVKFVKESK
DPLSDWLDSKFGATVRDNAIFSALPKHWENEFHKDMDALNVLRPHVLTRVSEYIPEIISY
IEKIISNNFAYEANGSVYFDVSSFDKNEKHHYAKLVPEAYGDTNSLQEGEGDLTTADQHS
EKHSPNDFALWKKSKPGEPAWNSPWGMGRPGWHIECSAMASAIFGPTLDIHTGGVDLKFP
HHDNEIAQSEAHFGNPEWVKYFLHSGHLTIAGCKMSKSLKNFVSIQDALSKYSARQLRFA
FLLHSWRDTLDYSQNTMECAVQYEKLFNEFFLNVKEATRTLAKQTSFETFGKWDLFEMEL
NKKFLAARENVHAALCDNIDTRSSLEALRDLVTAGNLYLRDRKPPNQVLLNDIGVYITQM
LRVFGVIAEPTKIGFPVSTGATANSEEAIMPYLSTLAQFRDRIRTQARSVKATEILKECD
LIRDEILPNMGVRLEDREGEPSAVKLVDKEILLREKEQKKQAELEKAAEKERKKAEAAVA
QAAKDAQKKIPPSELFKSETDKYSKFDENGIPTHDHEGKEVSKGQLKKLQKLYQAQEKRY
KEYLASQN
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagagagtacaacctgaatgggttttgccggccccaaatggtcctcaattgaaa
gtatttaatagtttaaccagacaaaaggaagtttttgtgcctttggctggtaagcgagtt
acatggtacagttgtggccccactgtttatgatgcctctcacatgggacatgccaggtca
tacattacttttgacattctaagaagagtactcactgattattttgggtatgatgtgttc
tttgttatgaatattactgatattgatgataaaattatcaagagagctaggcagaattac
ttgtttgagaaatatgttgctgaaaataaatcactggaagatatacttactgattctaaa
caggttcttcaaaaattatcttccaccaccaaaaataccactgatccagataaaaaacag
atgtatgaaaaacttctcatgagacttgaaaaagcaattgaggacctcgaaaaagcagtg
aaaagtggtaataggaagctggaaactgaggcaaaggtaaaatttgttaaagaaagtaaa
gatccactttctgactggctagacagcaaatttggtgcaactgttagagataatgctata
tttagtgctttgcctaaacactgggaaaatgagttccataaagatatggatgccttaaat
gtacttagaccacatgtgttgacaagggttagtgaatacatacctgaaatcatttcttac
attgagaaaatcatttcaaataactttgcttatgaggcgaatggttctgtttattttgat
gtgtcctcatttgacaaaaatgagaaacatcattatgcaaaacttgtaccagaagcttat
ggtgatacaaacagtttgcaggaaggggaaggtgacttgacaacagcagatcaacatagc
gaaaaacactcgccgaacgacttcgccttgtggaaaaagagtaaaccgggagaaccagct
tggaattcgccgtggggtatgggccgtcccggatggcacatcgaatgttcggcgatggct
tccgccattttcggacccacactagacattcacactggaggagtcgaccttaagttcccg
caccacgataacgagatcgcccaaagtgaggcacattttggtaatccagaatgggtcaag
tacttcttgcactcgggtcatttaacgatagccggctgcaaaatgtcaaaatctctgaaa
aatttcgtcagcatccaagatgctctgtccaaatattctgcgagacaacttcgtttcgcg
ttcttgctgcattcgtggagggacacgttggattacagtcaaaacacaatggaatgcgct
gttcagtacgagaaactgttcaacgaattctttcttaacgttaaagaggcgaccagaact
ttggccaagcaaacctccttcgagacgttcggaaagtgggacttgttcgaaatggaattg
aataagaaattcttggcggccagagaaaacgttcacgcagctttgtgcgataatattgat
accagatcatctctggaggcgctcagagatttggtcacggccggtaatctttacttgagg
gacaggaaacctccaaaccaggttttattgaatgacattggagtgtacattactcaaatg
ttgcgagtattcggagtcattgcagaacctacaaaaattggttttccagtctcaacagga
gcaactgctaatagtgaagaggctattatgccttatttgtcaactcttgctcaattcaga
gatcggattagaacgcaagccaggagtgttaaggcgacagaaatcttaaaagaatgtgat
ttgattagagatgaaattttaccaaacatgggagtgagattagaagacagagaaggtgag
ccaagtgctgtaaagcttgtcgataaagaaattttactgagagagaaagaacagaagaag
caagccgagttggaaaaggcggcggaaaaagagaggaaaaaggctgaagctgcggtcgct
caagccgcgaaagatgctcagaaaaagattcctcccagtgaactttttaaatcagaaact
gataaatattccaagtttgatgagaatggtatacctacacatgaccatgaaggaaaggaa
gtcagtaaaggccagttaaagaagttacagaagttgtaccaagcgcaggaaaagcggtac
aaggagtacttagcttcgcaaaattaa
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