KEGG   Aethina tumida (small hive beetle): 109594964
Entry
109594964         CDS       T06105                                 
Name
(RefSeq) DNA repair protein XRCC1 isoform X1
  KO
K10803  DNA-repair protein XRCC1
Organism
atd  Aethina tumida (small hive beetle)
Pathway
atd03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:atd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    109594964
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:atd03400]
    109594964
DNA repair and recombination proteins [BR:atd03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     109594964
SSDB
Motif
Pfam: XRCC1_N BRCT BRCT_2 LIG3_BRCT PTCB-BRCT F5_F8_type_C RTT107_BRCT_5
Other DBs
NCBI-GeneID: 109594964
NCBI-ProteinID: XP_049825573
LinkDB
Position
7:complement(join(13423580..13423751,13423809..13424045,13424122..13424175,13424227..13424298,13424348..13424602,13424653..13425292,13425383..13425920,13425984..13426034))
AA seq 672 aa
MPKIKIDHVISFSSEDSVHVANNILLADPAKKWKCSKPGEVSANIVLQLEKAYNITSIDI
GNENSAYIELLVARSSTNDEYKPLLVMSSFMTPLEARQNTNINKVRMFKLEDLSNPERNE
KWDRIKIVCTQPFNRHVQYGVSFINLYSSEAKSEENKTVQSQMIGKFTLRPDSPDHISTG
SLFAKRKEILKDEVLKGAAAIREASTSKTLAEYGTPTVKKKIKIVPNSSKKPSQDTEDKP
KPRNRDELLYSKDEDEKNEKIDKLVAMKAKEEEEKLELREKEIEERKKKEQRLKEEKERE
KRAKAAEDREKKAKTGTPKQERKKEGNSDSAKKLDTPRESNKRKHDDSGSSSVKKQKPSV
QTKPFGKLLDGVTIVISGILNPDRANLRTSARSLGAKYKPDWDNSCTHLICAYANTPKFN
QVKGKGKIVTRKWIEDCYRDRKRYPWRRYALDKADKTGNESEDEIWEKVDTPPACPKDDG
GDTEDEIEAIINSTKKKRKASTDTEDEIEGIKNSETPKVKKITKQAKNGSSSTSFQKADL
NDSETDDDLQIISSNGNKEDDVYIIDTDLEDIPELSSPNIVPKFKDFFNKKTFYIDSTFS
SDQIQFLRRYIVAYKGVLLDDPTENIDFIITVSANVENVKEINSSAICVSPQWISEVHNK
QRLVSMDNYILT
NT seq 2019 nt   +upstreamnt  +downstreamnt
atgcccaaaataaaaattgatcatgttatcagctttagcagcgaagattcagtccatgtc
gccaataacattcttctagcggatcccgcgaaaaaatggaaatgttctaaacctggcgaa
gtgtccgccaacattgtactgcaactagaaaaagcctacaacatcaccagcatagacata
ggcaacgagaactctgcctatatagaattattggtagcacgatcaagcactaatgatgag
tacaaacctctgttggttatgtcatcatttatgacgcccctggaggccagacaaaacaca
aacatcaacaaagttcgtatgtttaaactagaggatctaagcaatcctgaacgaaatgaa
aaatgggatagaattaaaattgtttgtacacaaccattcaacagacatgttcaatatggt
gtttcttttattaacttgtacagctcagaagcaaaaagtgaggagaataagacagtacaa
tcacagatgattgggaaatttactcttaggccagactctccagaccacatatcaactggg
agtttgtttgcgaagaggaaagaaatactcaaagatgaggtcctgaaaggtgctgcagct
attagagaagcatctacttccaaaaccttagcagagtatggtacaccaacagtcaaaaaa
aagattaaaattgttcccaacagcagtaaaaagccatcccaggacacagaagacaaacca
aaacccagaaaccgagatgagctcttgtacagcaaagatgaggacgagaagaatgaaaaa
attgataaattagtggcaatgaaagccaaagaagaggaggaaaaacttgaactcagggaa
aaagaaattgaggagaggaaaaagaaagaacagcgacttaaagaagagaaagaacgggag
aaacgggcgaaggcggcggaagatcgggaaaagaaagcgaaaacaggcaccccaaaacaa
gagcgaaagaaggaaggcaattcggactcggcaaagaagttggacacgcctagagaaagt
aacaaaagaaaacacgacgacagtggctctagtagcgtcaagaaacagaagccatcagta
caaactaagccatttggtaaattattggatggtgtgactattgtaattagtggaatttta
aaccctgacagagcgaatttaaggacgtccgcacgaagtttgggggcgaagtacaaacca
gattgggacaacagttgtacgcatttaatatgtgcctatgcaaatacaccaaaattcaat
caggttaaaggcaaaggtaaaattgtgacaagaaaatggatagaagactgctacagggat
agaaaaaggtatccttggaggagatatgctttggataaggccgacaaaactgggaatgaa
agtgaggatgaaatctgggaaaaagttgatactccccctgcatgtcctaaagatgatggt
ggggatactgaggatgaaattgaagctataattaattctacaaagaaaaaacgcaaagct
agtactgacactgaagatgaaattgaggggataaaaaattcggaaactccaaaggtaaag
aaaataactaaacaagcaaaaaatgggtcatcatccacttcatttcagaaggctgattta
aatgactcagaaactgatgatgacttgcaaataatatcaagtaatggaaataaagaggac
gacgtttatattattgacacagacttagaagacataccagaattatcatcaccaaatata
gtacctaaatttaaagatttctttaataaaaaaacgttttatattgattcaacctttagc
agtgaccaaatacagtttcttagacgttatattgttgcctacaaaggtgtgttattggat
gatccaactgaaaacatagattttattataacagtgtcagcgaatgtagaaaacgtcaag
gaaataaacagttccgcaatttgcgtttcacctcaatggatttccgaggtccataacaaa
caaagacttgtatcaatggataattacatattgacgtaa

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