Aethina tumida (small hive beetle): 109595566
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Entry
109595566 CDS
T06105
Name
(RefSeq) uncharacterized protein LOC109595566
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
atd
Aethina tumida (small hive beetle)
Pathway
atd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
atd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109595566
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
atd03041
]
109595566
03009 Ribosome biogenesis [BR:
atd03009
]
109595566
Enzymes [BR:
atd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109595566
Spliceosome [BR:
atd03041
]
Complex A
U1 snRNP components
U1 related factors
109595566
Complex B
109595566
Ribosome biogenesis [BR:
atd03009
]
Eukaryotic type
Pre-60S particles
Helicases
109595566
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
Cas3-like_C_2
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
109595566
NCBI-ProteinID:
XP_019866509
LinkDB
All DBs
Position
2:complement(join(23845368..23845732,23846887..23847283,23847457..23847954,23848015..23848942,23850917..23850954))
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AA seq
741 aa
AA seq
DB search
MQYNNNIFHSNSMYRSRPDHNDQFGKQSNYWCGPPQHSIAPVQDFGGPVTKQYKNKNQQD
NQQLATPVWSETELKPFRKNFYVPHNNIKNRQQHDVDLFRQKRDIIVRGTNIPHPNICFE
ENSFPEYVMQPLLKQGFNEPTAIQSQGWPIVLSGRDLVAIAHTGSGKTLAYILPATIHIN
SQQRPQRGEGPIVLILAPTRELAQQIQKVAHEFGSTTMIRNTCIFGGSPKGPQARDLERG
VEIVIATPGRLIDFLEKGTTNLHRCTYLVLDEADRMLDMGFEPQIRKIIQQVRPDRQVLM
WSATWPKQVQALAEEFLVDYIQVNIGSLSLSANHNIKQIVDVCDESEKEDKLSKLLKEIG
SDRNNKIIVFVETKKKVDDITKRIKRDGFSAICIHGDKSQPERDYVLSEFRNGKSSILVA
TDVAARGLDVEDVKYVINYDYPNSSEDYVHRIGRTGRCSQAGTAYAFFTANNQRQAKDLI
AVLEEAGQEITAPLQELAQSMRSTQNGRNHWRNNNRKKDNNSPGSNGSNNGGTRVGQKTW
TNKNFNNGGTDYRQNGMHNKGPRTNDGQMGRGPRNGGYGNSPMQQYNAYQNSQYQHHQPQ
GYQSSYSPPNMYQNAGPRTYGNGQRGYNGQQRGGYNQRQQYAGGPPPATSPNLYHTIQPQ
AYMMQPAPAAAATADGLQGIINHKFFQTTGGRIPGAGATNPCAYQSLGQGQANPFGQFAA
GPMPYAAYSYGQAPPTAAVQQ
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgcagtacaacaataatatattccacagcaattcaatgtatagatcaagacccgatcac
aatgaccagtttggaaagcaatcaaactattggtgcggccctccgcagcacagcatcgcg
ccagttcaagactttggtggaccagttacgaaacaatacaagaacaaaaaccaacaagac
aaccagcaacttgccacgcctgtatggtccgagacggagttgaagccgttccgcaagaac
ttctatgtaccacacaacaacatcaaaaacaggcagcaacatgacgtcgacctgttcaga
cagaaacgcgacataatcgtgcggggaacgaatataccccatccgaacatttgcttcgag
gagaacagcttccccgaatacgtgatgcagccgttgctcaagcagggcttcaacgaaccc
accgccatacaatcgcagggctggccgatcgtactcagcggcagggatctggtggcaatc
gcccataccggttccggtaagacattggcttacatactgcccgccaccattcacatcaac
agccaacaaagaccccagcgcggagaaggaccgatcgtcttgattcttgctccaaccagg
gaacttgcccaacaaatacagaaagtggcgcacgaattcggatcgaccaccatgatccgc
aacacctgcatctttggaggttcgcccaaggggccgcaggctagagatctggagcggggt
gttgaaatagtgatcgcgacgcccggccggcttattgattttctggagaagggcacgacg
aacctccacaggtgcacgtacctcgtcctggacgaggccgatcgcatgttggacatgggc
ttcgagccccagataaggaagatcatccaacaggtgcgacctgatagacaggtactgatg
tggtcggccacttggccgaagcaagtacaagcgttggccgaggagtttttggttgactac
attcaggtgaacattggaagtttgtctctttcggccaaccacaacataaaacaaatcgtt
gacgtctgcgacgagtcagaaaaagaagataaactctccaaactcttaaaagagattgga
tccgatcgtaataataaaataatcgttttcgttgaaaccaagaagaaggtggacgacatc
accaaacgcattaaacgtgacggtttctcggcgatatgcatccacggtgacaagtcgcaa
cccgaacgtgactacgtgctcagcgagttccgtaacggaaagtcctcaattttggtagca
acagatgtggccgccaggggattggacgtggaagacgtaaaatatgtcatcaactacgat
tatccaaactccagtgaggactatgtgcacagaatcggcaggactggaagatgttctcaa
gctggtactgcgtacgcatttttcactgccaacaatcagaggcaagcgaaggacttgatt
gccgttttagaagaagctggacaggaaatcacggctcctctgcaagagctggcgcagtcc
atgcgatcgacccagaacggtcgcaaccactggcgcaacaacaatcgcaagaaggacaac
aactcgcccggttccaacggatcgaacaacggcggcacccgtgttggacaaaagacctgg
acgaataagaatttcaacaacggcggtactgactacagacaaaacggtatgcacaacaag
ggtcccagaaccaacgacggacaaatgggacgcggcccaagaaacggtggttacggcaac
tcgcctatgcaacagtacaatgcttaccagaattcgcaatatcagcaccatcaaccgcag
ggttaccagtcatcgtatagtccaccgaacatgtaccagaatgccggacctagaacttac
ggtaacggacaacgtggttacaacggacaacaacgcggcggctacaaccagcgacagcaa
tacgccggcggcccaccaccggccaccagcccgaacctttaccacacgatccagccacag
gcttacatgatgcaaccggcgccggcggccgccgccaccgccgacggtctgcagggcatc
atcaaccacaagttcttccagacgacgggcggtcgcatacccggcgccggagcgaccaat
ccctgcgcctaccaatcgctgggtcagggccaggccaatccgttcggacagttcgccgcg
gggccgatgccctatgcggcctactcgtacggacaggcgccgcccaccgccgccgtgcag
cagtaa
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