| Entry |
|
| Name |
(RefSeq) short transient receptor potential channel 4-like
|
| KO |
| K04967 | transient receptor potential cation channel subfamily C member 4 |
|
| Organism |
atd Aethina tumida (small hive beetle)
|
| Pathway |
|
| Brite |
KEGG Orthology (KO) [BR:atd00001]
09150 Organismal Systems
09157 Sensory system
04745 Phototransduction - fly
109596133
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:atd04040]
109596133
Ion channels [BR:atd04040]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
109596133
|
| SSDB |
|
| Motif |
|
| Other DBs |
|
| LinkDB |
|
| Position |
4:join(11871397..11871556,11871611..11871766,11871820..11871981,11872034..11872278,11872330..11872564,11872634..11872801,11872853..11873124,11873178..11873424,11873478..11873766,11873817..11873980,11874034..11874221)
|
| AA seq |
761 aa
MSLFGADPGAHGRGPDRSLLFRANLLNEEMRRPSILLPHLEENEKKFFALVASGDVEKVQ
TFLNDNTDFNINCINFQGISALLIAVQSHNEDMVALLLVQRGIDVGDCVLHAVRENQLNI
LELLLNKVKSNSPSLEFVGVTHSTEFPDHVTPLILAAQCGHYEIIQMLLDRGHVINKPHH
PTCRCTECIDGMERNDLLHAETLRLNLYKAVSNPAYICHSSIDPILTAFQLSKELRECSF
LVPEFRTAYTELAQDISSFAVDLIACCRSTTEMEIILSQTAGATTYMSIYPRLVMGLDYK
QKDFVAHPNTQQIIEQAWIGNWHEYKLKSPIMKATYPFFRIVLLPVMLLVSIIFPRHTMI
DFWNIPINKMINHIAGYIVFLILIFLESNRDRTNQRRKPPTTGLEPFIIIFVIGNIWNTA
RMCLLQGPKRYFKYLWNWHAIINNTLFLLTFLFWLASEFDYIKYDQVDLERKYWHHLDPL
LISEGTFAIATIMAFFKLMFFCRLNYYLGPLQISLGKMCADMAKYITIFIIIIVSFSAGL
CKFYQYYDGMVQVDSNGIKTAQVSSFVNFISTMRTFFWALLCMSPLESADVIIENLPGDT
EKTTIINSHSFTETVGYIAFGLYEVLTVVMILNMLIATMSSTFQRVIDNLDVEWTFGKTD
FYLEYMMQTFLPSPFNLIPTPLGISTFMEMWTGRSNVKLVVSEQLGLSDDKEYEYPALIS
LLIQRYFREKDNSSSPSNELELIKAEIHELKNLIKDIINLD |
| NT seq |
2286 nt +upstreamnt +downstreamnt
atgagtctgtttggcgctgatccaggtgcccatggacgtggacccgatagaagcctactt
tttagagccaatctgttaaatgaagaaatgagacgaccaagcattttgttaccgcatcta
gaggaaaatgagaagaaattctttgcattagtagcatcaggtgatgttgaaaaggtacaa
actttcttaaatgataatactgatttcaatattaactgcattaacttccaaggaatttcc
gcactacttatagcagtgcaatctcacaatgaggatatggtagctcttttactagttcaa
agaggaatagacgttggcgattgtgtcctacatgcagttcgtgaaaatcagttaaacatt
ctagaactactccttaacaaagtcaaatcgaattcgccaagtttggaattcgtcggagta
actcacagcactgagttccccgatcatgtgacacctttgatcttggccgcccaatgcggt
cattatgagattatccagatgttgcttgatagaggccacgtaataaacaaacctcatcat
cctacttgtagatgtacggaatgcatcgatggaatggagcgtaacgatttgcttcatgcg
gaaacattaagacttaatttgtacaaggcagtatcaaatccagcatacatttgtcattcc
tctatcgatcctattttaactgcgttccaattgtcaaaggagctcagagaatgctcattt
ttggtaccagaatttcgtacagcctatacagaattggcacaggatattagtagtttcgcc
gtcgacttgatagcgtgctgtaggagtaccacggagatggaaatcattttatcacaaaca
gctggagcgaccacctacatgtcaatataccctagattggtaatggggcttgactataag
cagaaggattttgtagcacatcctaacactcaacaaataattgaacaagcttggataggc
aattggcatgaatataaactgaagtcaccaattatgaaagccacgtatccgtttttcaga
attgtgttgttaccggtgatgcttcttgtgtcaattatatttccccgccataccatgatt
gacttttggaatattccaattaataaaatgataaatcacatagcaggttacattgtattt
cttatattaatatttctggagtcgaatagagatagaaccaaccagagacgaaagccacca
acaactggtttagaaccatttattatcatatttgtcattggaaatatatggaacactgcc
agaatgtgtttgttacaaggtcccaaaagatattttaaatatctgtggaactggcacgcc
ataattaacaatacgctattccttttaactttcttattctggttggcatcagaatttgat
tacatcaagtacgaccaggtggacctggaaagaaaatattggcaccatttagaccctctg
cttatttctgaagggacttttgcaatagcaacaatcatggcctttttcaagctgatgttc
ttctgtcggcttaattactacttaggtccattgcaaatctccttaggaaagatgtgtgct
gacatggcaaaatacatcaccatatttatcatcattattgtgtcattttcggctggacta
tgcaagttttatcagtactacgatggaatggtgcaagttgattcaaacggaattaagacg
gcccaagtctcgagctttgttaattttatctctacaatgaggaccttcttctgggcgctt
ctctgtatgtctcctttggaatcagcagatgtgatcattgaaaatttgcctggagacacg
gaaaagacgacgattatcaattcgcattcatttacggagacagttgggtatattgctttc
ggcctttatgaagttttaactgtcgtgatgattttgaatatgctaatagccacgatgtcg
agtactttccaacgagtaattgacaatttggatgtcgaatggacatttggcaaaactgat
ttttatttagaatatatgatgcaaacgttccttccgtcaccatttaacttgattcctacg
ccactcggaatatccacgtttatggaaatgtggacaggccgcagtaatgttaaactcgtt
gtatccgaacagttaggattaagcgatgataaagaatacgaatatcctgcccttatttca
ctgctgatacaaaggtactttagagagaaagacaattccagttctcctagcaacgaatta
gaattaattaaggctgaaatacatgagttgaagaatttgataaaagatattatcaactta
gactga |