| Entry |
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| Name |
(RefSeq) probable DNA mismatch repair protein Msh6
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| KO |
| K08737 | DNA mismatch repair protein MSH6 |
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| Organism |
atd Aethina tumida (small hive beetle)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:atd00001]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
109596295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:atd03400]
109596295
DNA repair and recombination proteins [BR:atd03400]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
109596295
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
4:join(28737394..28737613,28739336..28739883,28739961..28740236,28740391..28740528,28740584..28741056,28741108..28741263,28741315..28741855,28741907..28742125,28742184..28742366,28742427..28742756,28742811..28743080)
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| AA seq |
1117 aa
MSKRQSNTLLNYFSSPKGKLTPKKEETVSSKAKPTPKKAQIVSPKPKATPNKEQHAFVKS
EDSEDITKRKLKQEVHSDGNESEEEQLISKPRKRIRVLSDDSSGTENESPNKPTTKKTKL
DSFQFKRRNSDSDESNKKQRIKSPVSESKLPKPAESISHIEGDIHSNWTHNKLEFLKPGK
IKDKSGHKMDHPDYDPHTLYVPEDFLNKQTPAMRQWWVLKSEHFDSVLFFKVGKFYELYH
MDAVVGVQQLGFTYMKGEFAHSGFPETAYAKMASTLIDLGFKVARVEQTETPEMMNERIK
TTGKKSKFDKVVSREICQVTTKATTIFSAQMPEARSSSACNLFAICEVPQGNGTSRFGVC
FIDTSIGIFHLTEFQDDKHCSKLLSLFAENPPTSILTERNKHKSYFNELLTTYFKDIRKE
SLLPKSQFYTATSTLEKLSESCYFRNKDGKFEWPALFQEIADGCQPKPEYELALRALGAC
HWYLKDSELDIQVFSLAKFEKYHSLDLNTKNKSIAQDYMVLDSTTIRNLDLLGGKGSLQK
TLDHCQTAFGKRLLSQWICRPLCDINKIQERQKAVSELVNNPSVLKSTQEILKKLPDLER
QIAKIHIYGNKFCAQNHPDGRAIFYEAVTYSKTKIKDLLKTLRAFEQVQELPTIFKNCES
RLLRKITQNKPDGLFLDLSETLNFFKNSFDHQSAEKEGKIIPQKGLDADYDKSEDRIDEI
NKQLADYLKEQSKKFGCSLSYFGNDKKRYQLDIPEKKTHLVDSGYYLEGARKGKSKRYHT
DTTKKFLSDMMRAESDKAKILLDLNRRIFEKFGDRRDEWDQVIHCLTILDVICSLAEYAA
SFSHDICQPKLKSMDEDASISIENGRHPCVLNINTFVPNDVKMGVDDHAKILLLTGPNMG
GKSTLMRQVAIISVMAQMGCFVPASYCEMNLVDRIFTRLGAYDDIVQGQSTFFVELSEAS
SILQHATKYSLVLLDELGRGTSTHDGNAVATAYVKKLREIQCRTFFSTHYHTLVDHFIDD
KDIQLGHMACVVENDEDPTEESVTFLYKIAEGKCPKSYGFNAARLAGLKHEIIARGREVA
KQLESESTNRTVFSKIFTEINTCSIADIRKTLASLVL |
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| NT seq |
3354 nt +upstreamnt +downstreamnt
atgtccaaacgacagagcaatacattgttaaactacttttcttctcctaaagggaagtta
acacctaaaaaagaagaaacagtatcatctaaagcaaagccaactcctaagaaagcccaa
atagtttcacctaaaccaaaagcaactcccaacaaagagcaacatgcctttgttaaatct
gaagattcagaagatattactaaaaggaagttaaagcaagaagtacattctgatggaaat
gaaagtgaggaagagcagctaatatctaaaccaagaaaacgtataagggttttgtctgac
gactcatccggaactgaaaatgaatcacctaataagccaacgacaaaaaagacaaaactg
gattcatttcaatttaaacgtcgaaattcagattctgatgaatcaaacaagaaacagaga
attaaaagtccagtttcagaatctaagttgccaaagccagctgaatctatttcacacatt
gagggagacattcattctaattggacccacaataaattagagttcttgaagcccggcaag
ataaaggacaaatccggccacaaaatggatcatccagattatgatcctcacactctttat
gttccagaagactttctgaacaaacaaacaccggcaatgcggcaatggtgggttctcaaa
agtgagcatttcgattctgttttatttttcaaagttggcaaattctatgaactgtaccac
atggatgctgtagttggagttcaacaattaggattcacttatatgaagggtgaatttgca
cactccggatttcctgaaacagcatatgcaaaaatggctagtactttgatagatctggga
tttaaagtagcaagagttgaacaaactgagacaccagaaatgatgaatgaaagaattaag
accactggtaaaaaaagtaaatttgacaaagttgtttcaagagaaatttgccaagtaact
acaaaagcaaccacaatttttagtgctcaaatgcctgaagctaggagcagttcagcttgt
aatctatttgccatttgtgaagttcctcaaggaaatggaacgtctagatttggagtttgc
tttatagacacttctattggaatatttcatttgactgaatttcaagacgataaacactgt
tctaaactattaagtttgtttgcagaaaatcctccaacctctatcctcactgaaaggaac
aaacacaagtcatactttaatgaacttttaaccacttatttcaaagatatccgcaaagaa
agtttattgccaaaatctcagttctacacagcaacttcaactttagaaaaattatctgaa
tcctgctattttcgaaataaagacggaaagtttgaatggccagcacttttccaagaaata
gcagatggatgtcaaccaaaaccagagtatgaactggctttaagggcacttggtgcctgt
cattggtacttaaaagactcggaattagacattcaagtattttcattagcgaaattcgaa
aagtatcattctctggatttaaatactaagaataaatctatagcacaggactatatggtt
ctagattcgactactattcgaaatctggatcttcttggtgggaaaggttcactgcagaaa
actttggatcattgccaaactgcgtttggtaaaaggttgttgtcacaatggatttgtcgt
cctttatgtgatattaataaaattcaagaacgacagaaggccgtgtcagaactagtaaac
aatccgtctgtcttgaaatcaactcaagaaattttgaagaagttgccggatttggaacgt
caaatagctaagatccatatttatgggaacaaattttgtgcacagaatcatccagatggt
agagctatattttatgaagcagttacatactccaaaacaaaaataaaagatttattaaaa
acattaagggcctttgaacaagtacaagagttaccaactatttttaaaaactgtgaatca
agactattaagaaaaataacacagaacaaacctgacggcctcttcttggacctgagtgaa
actttaaacttcttcaaaaattcatttgatcatcaatctgctgaaaaagaaggcaaaatc
attccacaaaagggccttgacgctgattatgacaagagtgaagatcgaattgatgaaata
aacaaacaattggctgattatttaaaagaacaaagtaaaaaattcggatgttctttaagt
tacttcggcaacgataaaaaaagatatcaacttgatataccagagaaaaagactcatttg
gtagattctgggtattacttagagggtgcgaggaaaggtaaatcaaaacgatatcataca
gatacaacaaagaaattcctgtctgatatgatgagggcagaatctgacaaggcaaaaatt
ctcttggatttgaatagaagaatctttgaaaagtttggtgaccggagagatgagtgggat
caggttattcactgtttaacaattttggatgttatctgctctttggccgagtatgcggca
tccttttctcatgacatttgtcagcctaaacttaaatctatggatgaagatgcgagtatt
tctattgaaaatggtcgacatccatgtgtcttgaatataaacacatttgtaccaaatgat
gtcaaaatgggggtggatgatcatgcaaagattttacttcttactgggccaaatatgggt
ggtaaatctactcttatgagacaagtggccataatttcagttatggcacaaatgggctgt
tttgttcccgcctcttattgtgagatgaatttggtagacagaatctttacaaggctgggg
gcatatgatgatattgtacagggccagtccacattcttcgttgaattgtcagaagcttct
tctattctacaacatgccacaaaatattcactggttcttttggatgaattgggcagggga
acttcaacacatgatggtaatgctgttgcaacggcttacgtcaaaaaattgagggagatt
cagtgtcggaccttcttctctactcactatcacactttggttgatcacttcattgatgat
aaggatatacaactaggccacatggcttgcgttgttgagaatgatgaagatcccacagag
gaatcggtcacattcttgtataagattgcggaaggcaagtgcccgaaatcgtatggtttc
aatgctgcacgtttggctggtttaaaacacgaaataattgccagaggacgcgaagttgct
aaacagttggagtctgagagtaccaaccgtacagtgttctccaaaatatttacggaaatc
aacacttgttctatagctgatattcgtaaaacgcttgccagtttagttttataa |
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