Aethina tumida (small hive beetle): 109596625
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Entry
109596625 CDS
T06105
Name
(RefSeq) nucleoporin P54
KO
K14308
nuclear pore complex protein Nup54
Organism
atd
Aethina tumida (small hive beetle)
Pathway
atd03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
atd00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109596625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atd03019
]
109596625
Messenger RNA biogenesis [BR:
atd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
109596625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Nup54_C
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
109596625
NCBI-ProteinID:
XP_019867753
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All DBs
Position
3:complement(join(28239438..28239665,28239718..28239837,28239894..28240150,28240207..28240791,28240853..28241296,28241354..28241626,28248153..28248210))
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AA seq
654 aa
AA seq
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MSFTFGSTSQPTFGATQPKVSSFGSGFGTPASTASTGFGFGAQPQQQAAPAFGASTFGAP
AASTAPTFGSTFGAPASSAPSFGNTFGAPATSTPAFGGGFGTAAATPSLFGAQTTKPSLF
STPASGTSTLFGGTQTTQATGLFGATNTSAAPSLFGTATSSTPSLFGSSFGTTQTSAPSL
FGTTGTTQTGFGTGGGLFNTATSSAPSLFGSTGFGTSTTTSGFGGFGGTTGGFGGFGTNT
STTNLFGNSFGAKPATTTAPTQTPQSNAQLAVASVYAINVFNDERDDILKKWNMLQACWG
TGKGFYNMQQPPIDYKCQNPFYRFKAIGYNIIPEQDNSEGIVKLIFNKKISELQNHREVL
KNGIGGILGNKPNLTVDVTQIKSASDSQTEVRITVSEKGVTGSVRKIPATDLSAYLNQPT
QKQQLSNVGVTCITPFITPSKAELEEYLKSPPEGVDAQMWQAAIQDNPNPKKYIPVAING
FSDLRSRMISQEHQTGLHQAFLEKVNKEISELKTKDASSTAQISELKHKFLELQHRILRI
LVKQESTRKVGIAIQPEEDMLRGRLEMMYAHLNAPKQYKGQINELLSHVKLIEGSKKQST
QNYRIDTDSEEDIKQFLKMEQDGVSQLINIVKCDLQAIKIINEGLQQMLQSNTH
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttacatttggaagtacttcacaaccaacttttggagccacacaacctaaagtt
tcatcctttgggtctggcttcgggacgccggcgtcaacggcgtccaccggctttggtttc
ggtgcacaacctcagcagcaagcagcacccgctttcggagcctccacctttggggcaccg
gcagcctctaccgcccccacatttggctctaccttcggagctcccgccagtagcgccccc
tccttcggtaacacattcggcgcccccgccacctcgaccccggccttcgggggtggattt
ggcacggccgccgccaccccaagtttgtttggagcccaaaccacaaaaccgtcacttttc
tcgacgccagcttctggtacttcaactttatttggaggaacccaaacaactcaggcgact
ggcctctttggtgcaactaataccagcgcagctcctagtctctttggcacagcaacctct
tccaccccgtctctttttggtagctcctttggcaccactcagacgtcagccccaagtctc
tttggcaccaccgggacaactcaaacagggtttggcactggcggaggattatttaatacc
gccacatcgtccgctccgtcactgttcggttcaaccggtttcggaacgagtaccacaact
tctggattcggaggttttggcgggacgaccggtggttttggagggtttggcacgaatacc
agtaccaccaatttgtttgggaattcatttggagctaaacctgctacaacaactgcacca
actcaaacaccccagtcaaatgctcaacttgctgtagccagtgtatacgcaataaatgtg
tttaatgacgaaagagacgacatcttaaagaaatggaatatgctgcaggcttgttggggc
accggcaaaggtttttacaacatgcaacaaccgcccattgattataaatgccagaacccc
ttctatcgtttcaaagccatcggttacaacataattccggaacaagacaactcggaaggg
atagtcaaattaatatttaataaaaagatttcagagttacaaaaccacagggaagtatta
aaaaatggtatcggaggcattctcggaaacaagccgaatctaactgtggacgtgactcaa
attaagtcagccagtgattctcagactgaggtcagaattactgtatctgaaaaaggtgtt
actggaagcgtcagaaaaataccggccaccgatctttcagcctatttaaatcagccaact
caaaagcaacaattatctaatgtaggagttacttgtataacgccttttattactcccagc
aaagctgaactagaagaatatttgaaatctccacctgaaggagtcgacgcccaaatgtgg
caagctgctatacaagacaatcccaatcccaagaaatacattcctgtggcaataaacgga
ttttcggacttaaggtctagaatgataagtcaagaacatcagactggtctccaccaagcc
tttctggagaaagttaacaaggaaattagtgaactgaagactaaagatgcttcttcaacg
gcccaaatatccgaattaaaacataaatttttagaattacaacatcgcatattaaggata
ttagtaaaacaggaaagtacgagaaaagtaggcatagcgattcaacctgaagaagacatg
ttaagaggacgtttggagatgatgtatgctcacttaaatgcgccaaaacaatataaaggc
caaataaacgaattactttcacatgttaaattgatagaaggtagtaaaaaacaatccacc
caaaattatagaatcgatacagattcggaggaagatattaaacagtttttgaaaatggaa
caggatggtgtttctcaattgattaacatagtcaagtgtgatttacaggctattaaaata
ataaatgagggcttgcaacaaatgttacagagtaatacccattaa
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