Aethina tumida (small hive beetle): 109597295
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Entry
109597295 CDS
T06105
Name
(RefSeq) E3 ubiquitin-protein ligase PDZRN3
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
atd
Aethina tumida (small hive beetle)
Brite
KEGG Orthology (KO) [BR:
atd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
atd04121
]
109597295
Enzymes [BR:
atd01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109597295
Ubiquitin system [BR:
atd04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
109597295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
109597295
NCBI-ProteinID:
XP_019868504
LinkDB
All DBs
Position
1:complement(join(256604..256918,257536..257736,257796..258225,258308..259035,259096..259194,259255..259422,260738..260971,271513..271533))
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AA seq
731 aa
AA seq
DB search
MDFIILKVNGTDVSSFPHEDAVRAFLTAQEPIVVEVKRRISESPIEHKTVSSKTTSSIAC
QTELSGYAWIEENSLDCLPHDIDLEEVTLRKCSSDEKLGLTVCYSSGSEADTCTEVYIRD
IAPQSVADRDGRLRQGDQILQVNGKDVANKEDTESLFAENRKAVTLLVSRCYARSEDYLD
TEPFVDTLSPGGKSTTGGYQNSLIEQLVQQQQEQQAELQNFSRIDNPQLPPAPPKVPGHF
IQDKLNLTNSLVRSKMDSINHEISELDIRMQNIQLVKLDKRKPPPQLPHIPAPPESDTEH
IYETIPESMDSELEPIYSCPYEMDGDDNMIEHWLKSHQDHDIDVDDDWLQQMKEHKQFKE
HEDNNKITKSKSSKSNSSGEEHENSSSAYNTGGSCNSNPLTFELASSQDYKHKDMYRSTL
ILCSPEKEDTTKETFKEKEKEKEIKSNIECEACRRQISSKSKKSKSCTRIGCDSNTESSP
PTKSSMIQPPHILSDTMYTNVANLQQTMLLQQQLFRQALVQQQGNVNIDVTAAAAAAAAA
AGKPPLPASSFTSPSLSHYQVNSSHDQPESTTLETQRMEWKVKRRPDGTRYIARRPVRNR
ILKNRALKISEERAGLTTEDDTISELKIGRYWTKEERKKHLEKSKERKQRQEILLASRNM
MTDENSELIKHIPTKKAANNIDNTVKKHKNKKNIHKDSYENFTTVQEIIVNGPKVTNSNS
KIAGLLSVTTV
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atggattttatcattctaaaggttaatgggactgatgttagcagtttcccccacgaggat
gctgttagagcattcctaactgctcaagaaccaattgtcgttgaagtaaagagacgaatc
tccgaatctccgattgaacataaaaccgtcagtagcaaaacaacttcatctattgcatgc
caaacggaactatccgggtatgcttggatagaagagaattcactcgactgtcttccacac
gatattgatttagaggaagtaactctcagaaaatgcagtagcgatgaaaaactaggatta
acagtatgctatagttctggatcagaagcggatacatgtactgaagtttatataagagac
atagctccacaaagtgtagctgaccgagacggaaggcttagacaaggagaccaaattctt
caggttaacggaaaggatgtagcaaacaaagaagataccgaatcattgtttgccgaaaat
agaaaagcggtaacactattagtcagtcggtgttatgccaggagtgaagattacttggat
acggaaccattcgtcgacacattatctcctggtggcaaatcaacaacaggtggttaccaa
aacagtttaatagagcaactggtgcagcaacaacaggaacaacaggcagaattgcaaaac
ttttccagaatcgacaatccccaactgccaccagcacctcctaaagttcctggacatttc
attcaagacaaattgaatctgaccaattccctggtacgttcaaaaatggattcaataaat
catgaaatctccgaactagatattaggatgcaaaatattcaacttgttaaactcgataaa
agaaaaccaccccctcagcttcctcatattccggcaccacctgaatctgacaccgaacac
atttatgagactatacctgaatcgatggattcagaattagaaccaatatattcctgtccg
tacgaaatggatggagatgataatatgatcgaacattggctcaagagtcatcaagaccac
gacattgacgtggatgatgattggttacaacaaatgaaagaacacaaacaattcaaggaa
catgaagataataacaaaattacaaaaagtaaatcttcaaaaagcaatagcagcggcgag
gaacacgaaaatagttcaagtgcttataacacaggaggatcttgtaatagtaatccctta
acttttgaattagctagtagccaggactacaaacataaggacatgtacagatctacgtta
atactgtgttccccagaaaaagaagataccacaaaagaaacatttaaagaaaaagagaag
gaaaaagaaattaaatcgaatattgaatgtgaggcgtgcagaagacaaatttcttctaaa
tcaaaaaaatcaaaatcatgtacaagaattggatgtgacagcaacaccgaatcttctccg
cccaccaaatctagcatgattcagcctccacacattctctctgatacgatgtacacaaat
gtggcaaatttacagcaaactatgttgttacaacagcagttatttagacaagctttagtt
caacaacagggaaacgttaatattgatgttactgctgctgctgctgctgctgctgcagct
gctgggaaaccaccactcccagcttctagttttacatcaccgagtttgagtcattatcaa
gttaattcgagccacgatcaaccagaaagtacaactctggaaactcaacgcatggaatgg
aaggtgaaaagaagacctgatgggacaagatatattgcacggcgccctgttcgaaataga
atattaaaaaacagagctcttaaaatttcagaagaaagagctggattaactactgaagat
gatacaatatctgaattgaagattggaagatattggacaaaagaagagaggaaaaaacat
ttagaaaaatccaaggaaagaaaacaaagacaagaaattctattggcatcaaggaatatg
atgacggatgaaaatagtgaattaataaagcacattcccacaaagaaggctgctaataat
attgataatacagttaagaagcataaaaataaaaaaaatatccataaagatagttacgaa
aattttacaactgttcaagagataattgtcaatggtcccaaagttaccaattctaatagt
aagatcgcgggtcttttgtcagttacaactgtctaa
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