Aethina tumida (small hive beetle): 109597351
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Entry
109597351 CDS
T06105
Name
(RefSeq) LOW QUALITY PROTEIN: CCR4-NOT transcription complex subunit 10
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
atd
Aethina tumida (small hive beetle)
Pathway
atd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
atd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109597351
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atd03019
]
109597351
Messenger RNA biogenesis [BR:
atd03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
109597351
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_14
Motif
Other DBs
NCBI-GeneID:
109597351
NCBI-ProteinID:
XP_049817882
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All DBs
Position
1:complement(join(58160820..58160884,58160942..58161127,58161179..58161657,58161712..58161833,58161902..58162092,58162365..58162513,58162568..58162674,58164295..58164641,58164704..58164845,58164900..58165056,58165107..58165180))
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AA seq
672 aa
AA seq
DB search
MDRDEDNITDQERDISQNALTEFKKKNYGSCLQQLNLLENKAHDFKVMHNKAVIEFYKSD
LKKIDAFQANLNSINNKHHIKIEKLDDVDHCIAYYNQAVVLYHQRQYTASQRIMEKVYKF
IEPMEDSLAKQVSLLAIELQLCMRQPDKALTLISYLENNVLNEASPTKGPEKKSRDKDKK
VCXLLXXLQLTTNTXNYQITGDNLEEFRKKLIKYKIRCSLMSHNLTKAGKEIQLLSKGKN
NIDYLFMSAHLEYLKGNIQESLKIVKSIDEDSLNYNDCSESSMILCNNNIGILMHALGKP
NLACHYFQEAIKKDMAIHSDNKKESNDKSLYYLGGSKYHELMYNLGIAMLHAGKAAQAFE
CLIIAVRRYHRNSRLWTRLAECCIMVHKATNEVDFDVQKKQKEIIVDVIGTKEKQKIVIN
SYLSNDKKYSCDSQSYAVPVPSLEFALLCLRNAQILIPTDSTSNSAPMFLVAGISPPAPL
PNPGPAPSNPLSPDSMQSLKNHILICSSYVALCLGDYILALEHARNLLAQPKMSGIHKLL
AHMYAAESLVLLENINEALDHLDPENIKDISFNFPTDGGPDEVKTGPPPKWFPTSLGSAH
AVLQYNIAVAKTIRGQLDQASALLKQVWSMNKSCRVPAHIIMLVIYIELKLGHADIARNL
IKQHYFHHRING
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atggacagagacgaagacaatattacagatcaagagcgtgatatatctcaaaatgcgttg
actgaatttaaaaagaaaaactacggaagttgtctgcaacaactcaatttattggaaaac
aaggcacatgatttcaaagtcatgcataataaagctgtgattgagttctataagagtgat
ttaaagaaaattgatgcgtttcaagcgaatttaaacagcatcaacaacaagcatcatata
aaaattgaaaaactagatgatgtagaccactgtattgcatattacaatcaagcagtggtt
ctttatcatcagcgtcagtacactgcatctcagagaattatggaaaaagtctacaagttt
attgaaccaatggaagactcattagcaaagcaagttagtttactagcaattgaattgcaa
ttatgcatgaggcagccagacaaagcattaacattaatttcttatctagaaaacaatgtt
ttaaatgaggcttcacctacaaaaggtccagaaaagaaatccagagataaagataaaaag
gtgtgttagcttttataataattacaacttacaactaatacataaaattatcagattact
ggggacaacttagaagaatttaggaagaaacttataaaatacaagattcgatgttcattg
atgagccataatttaacaaaagccggaaaggaaatacaattgctttctaaaggaaaaaat
aatatcgactatttgtttatgtcggcacatttggaatatttaaagggtaatatacaggag
tcactgaaaatagtcaaatcaattgacgaggattctttgaattataatgattgctcagaa
tcgtctatgatattatgtaataataatattggaatattaatgcatgctttgggaaaaccg
aatttggcttgtcactatttccaggaggccattaagaaggatatggcgatacactctgac
aataaaaaagaatccaacgataaatctttatactacctgggcggatccaagtaccatgag
ttgatgtacaatttgggtatcgctatgttacatgcaggaaaggcagctcaagcattcgaa
tgcttaattattgctgtacgacgataccacagaaactcccggctctggacgagacttgca
gaatgctgcattatggttcacaaagccaccaacgaggtggatttcgacgttcaaaagaaa
caaaaagaaataatcgtggatgtgataggcactaaagaaaaacagaaaattgtaattaac
agttatctctcaaatgataaaaaatacagttgtgatagtcaatcgtatgcggtccccgtg
ccttctttggagtttgccttgttatgcctgcgaaatgctcagatattaatacctacggac
tcgacatctaacagtgcacccatgtttttggtagcaggcatatctcctcctgcaccactt
cctaaccctggaccagcaccgtccaatcccttaagccctgacagtatgcaatctttgaaa
aatcacatattaatatgtagttcttatgtagccttgtgcctgggagattatatacttgcg
ttggaacacgccaggaatttgctagcacagcccaaaatgtctggcattcacaagttatta
gcgcacatgtatgctgcagaatcactagtattgttggaaaacattaacgaggctttggac
catttggatcctgagaacattaaagacatatcgtttaacttccccaccgacggcggtcca
gatgaagtcaagactggaccaccaccaaagtggttcccgaccagtttaggaagtgcccat
gcagtattacagtataatatagctgtagcgaaaaccattagaggacaactagaccaagct
tcggcgttactcaaacaagtttggagcatgaataaatcctgcagagttcccgctcacatc
atcatgttagtcatatatattgagttaaaattaggacacgctgatatagcaagaaatttg
ataaagcaacactactttcatcatagaataaatggatga
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