Aethina tumida (small hive beetle): 109597850
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Entry
109597850 CDS
T06105
Name
(RefSeq) protein PAT1 homolog 1
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
atd
Aethina tumida (small hive beetle)
Pathway
atd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
atd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109597850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atd03019
]
109597850
Messenger RNA biogenesis [BR:
atd03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
109597850
mRNA degradation factors
5'-3' decay
Decapping complex
109597850
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
109597850
NCBI-ProteinID:
XP_019869189
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Position
6:join(18747459..18747497,18747821..18748001,18748054..18748199,18748256..18748492,18748545..18748802,18748866..18749360,18749483..18750175,18750239..18750493)
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AA seq
767 aa
AA seq
DB search
MADTFFDFDTTLKNGDDLLPPDEDEMLDNEEEYDALNDETFGGLGDASSLDDWEQQHEQF
AEFAEIKKQNEQIENSISQVLEDDWNRVLNDKSVWAYPSKNGDSLGLSDSILTSLEKVSK
SFLDLINEPKKPVATQQPSSSNSSTSGEQSSKICTVEELEKNLILSSKHVPTPQQQQSQN
VPRHFAFGQVRPDGFFNQGLPALGQLPQRPPPGLAPMGMAPPPGLRPIGPPQHQAPQRME
LRGPHPHMHMPPPPPGMVRLPPPQGPPFVGPNGMPMMPPRGLMYPAMYMPGMRPPPPGHR
PQQPYFHHHHHQQQQHSPQNRQRHDSNSGSSGFNRHSSPHPQQQHHHHPHHQQPQEQRDE
YAGLMTHREKQWLLTIQMLQLNTGTPYFDDYYYTVFKERKKKNRQEEAAAQERRYQQQRR
DQRGGNGERQETTLTPRVYTPLQFENSLGKLQCGSVTAPRKIIDMDIVTPDKDGDTTQTP
RDTRKIKQLLLELEVMYCILLKAEDLHNPLAISNMDKLREIKQKQRLRELDLAPTAEQKQ
EILRIFKQESEPVVENQTDYIWKIVNGLLHDDKLANFMTIRKGKMLLLRTLPHLTPDVFS
QQLLEIWTRILASLPITGRRDQSGDNIFPKFQPFFKTFARNITMSNILDIVTGLVEVIKQ
ENSRSTPLSHQGKPPLYFVLLNKFGVSALVILFIRTEYLISTDAATDKQQNDWSNFLVSW
SEQSGLVAKVATPLEPIPSQIFTKHCNRFDVLTADKVALLAKHFVDN
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atggctgatacgttttttgatttcgacacaacgctcaagaatggggacgatttgctacca
ccggacgaggacgagatgctggacaatgaggaggagtatgatgccctcaatgatgagaca
ttcgggggtttgggcgacgcatccagcctcgacgattgggagcaacagcacgagcagttc
gccgaattcgctgagatcaagaagcaaaacgagcaaatagagaattcaatttcacaggtg
cttgaggacgactggaatagggtgctgaacgataaatctgtttgggcgtatcctagcaag
aatggtgatagcttgggactctctgatagtatactgacgtctttggagaaggtctccaag
tcatttctggatttgataaatgaaccgaaaaaaccggttgcaacgcagcagcctagttcc
agcaacagcagcacaagtggtgagcaatcaagtaaaatttgtactgtcgaggagctggaa
aagaacctaattttgtcgtctaaacatgtaccaacccctcaacaacaacaatctcaaaat
gtcccaagacatttcgcttttggacaagtacgaccagatggtttctttaaccaaggttta
ccagctttgggccagttgccacagagaccaccacctggactggcacctatggggatggcg
ccgccacctggcttgcgaccaatcggcccgccacaacatcaggctcctcagagaatggag
ctgaggggaccgcatcctcatatgcatatgccccctccgccgcccggcatggtgcggctg
ccgccacctcaggggccaccatttgttggcccgaacggcatgccgatgatgccgccacgg
ggtcttatgtatccagcgatgtacatgccggggatgcgtccaccgccaccaggccacagg
ccacagcagccctactttcaccaccaccaccaccagcagcaacagcactcgccccagaat
cgccagcgtcacgactcaaattcgggcagttccggcttcaaccgacattcgtcgcctcac
ccgcaacaacagcaccaccaccacccccatcaccagcagccgcaggagcagcgtgatgag
tacgcgggcctgatgacgcatcgcgagaagcagtggctcctgacgatacagatgctgcag
ctgaacacgggcacgccctatttcgacgattattattacaccgtgtttaaagagaggaag
aagaagaacagacaggaggaggcggcggcacaggagcgtcgctaccaacagcagagacgc
gatcagcgcggcggcaacggcgaacgtcaggagaccacgctgacgcctcgcgtttacacg
cctctgcagtttgagaactctttggggaaattgcagtgtggttcagtaacagcaccgaga
aaaataatcgacatggacatagtgacgccagataaggacggcgacacgacccagacgccg
cgagacacgcggaagatcaaacagctgttacttgaactggaggtcatgtattgcatactg
ttaaaggctgaagatctgcacaatccattggccatcagcaacatggacaaattacgtgag
attaaacagaagcagcgactgagggagttggacttggctccaactgctgaacaaaaacaa
gaaattttacgtatttttaaacaagaaagtgaaccggtcgtcgagaatcagactgactac
atttggaagattgttaatggtttgttgcacgacgacaaattggccaactttatgaccatt
agaaaaggaaagatgctgctactgagaaccttaccgcatttgaccccagacgtgttctca
caacaactcctggagatttggacgaggattttggccagtttaccaataaccggacgcaga
gatcaatcaggggacaatattttccccaagtttcaaccgtttttcaagacgttcgccaga
aacatcacaatgtcgaatattttagacatagtaacaggtctagtggaggtgataaagcaa
gaaaacagcaggagcacacctttaagtcaccagggaaagccaccactttacttcgttctc
ctcaacaagtttggtgtttccgccttggtgattctgttcataagaacggagtaccttata
tcaactgacgctgcgacagacaagcaacaaaacgactggtctaacttcctggtgagctgg
tcagagcaatcaggattggtggccaaagtggcgacgcccctggagccgattccctcgcaa
atcttcaccaaacattgcaaccgtttcgacgtgctgaccgctgacaaagtggcgttgctc
gccaagcatttcgtggacaactaa
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