Aethina tumida (small hive beetle): 109597860
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Entry
109597860 CDS
T06105
Name
(RefSeq) E3 ubiquitin-protein ligase FANCL
KO
K10606
E3 ubiquitin-protein ligase FANCL [EC:
2.3.2.27
]
Organism
atd
Aethina tumida (small hive beetle)
Pathway
atd03460
Fanconi anemia pathway
atd04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
atd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
109597860
09124 Replication and repair
03460 Fanconi anemia pathway
109597860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
atd04121
]
109597860
03400 DNA repair and recombination proteins [BR:
atd03400
]
109597860
Enzymes [BR:
atd01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109597860
Ubiquitin system [BR:
atd04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
109597860
DNA repair and recombination proteins [BR:
atd03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex
109597860
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FANCL_d3
FANCL_C
SLX1_C
zf-RING_2
FANCL_d1
zf-HC5HC2H_2
zf-HC5HC2H
PHD_NSD
FANCL_d2
YopA_M
zf-rbx1
zf-RING_16
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
109597860
NCBI-ProteinID:
XP_019869200
LinkDB
All DBs
Position
6:complement(join(18859808..18859837,18859888..18859956,18860014..18860360,18860416..18860980,18861035..18861133))
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AA seq
369 aa
AA seq
DB search
MSDTDLELLIQYPLIQKHVNNNEITYKGIVEINDEDFRIELKQTQNFFKFTELNDLNGHT
SELNTLLVDKRNVLDVLRTFKDFVIKTLPKCAKINPVSRYRTVLQQYNEFTKFYLNLKTC
RLLPDLTRICLSFTDDGQRIHGLEIAVDPAEKINYFKLENYDLPKQKFKINSNLIVLFEE
VLGVVDQLQPYFNFMDTLDSSSCVLDPLHAKKCDSYRRINLGENASVLVTVDPYNVNQRP
DLKFLGPERIVDLYRSRLNDNLESWDYNNDPFQQLLHLLGLEEFPQNNKQSNSDMELLKN
DQECAICYSFNLGQKVPDVVCKNESCENVFHNECLFEWLMSINAKRVYYEIIGSCPNCEK
PISCINPLN
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgagcgataccgacctagaactgttaatccaataccctttaatacaaaaacacgtgaac
aacaacgaaataacttacaaaggaatcgttgaaataaacgatgaagattttcgaattgaa
ctaaaacaaacgcagaatttctttaaattcaccgaactgaacgacttaaatggacacaca
agtgaattgaacacccttttagtggacaaacgaaacgttttggatgtgctaagaactttc
aaagacttcgtcattaaaacgctgcctaaatgtgccaaaattaacccggtttcgcgttac
agaacggttctacaacaatacaatgaatttacaaagttttacctcaacttaaagacatgt
agattgttacctgatttaacgaggatttgtttatcatttacggatgacgggcaacgaata
cacggcttggaaatagccgtcgacccggcggagaaaattaattacttcaagttggagaac
tacgatttgcccaagcaaaaattcaaaataaactccaacttaattgtgttgttcgaggag
gttttgggtgttgttgaccaattgcagccatatttcaattttatggataccttggacagc
tcgtcgtgcgttttggatccgctgcatgctaaaaagtgcgacagttataggagaattaac
cttggtgagaatgcctctgttttggtcacagtggacccgtacaacgttaatcagcggccc
gatttgaagtttttggggccggaacgtattgttgatttgtacaggagtagactaaatgat
aatcttgaatcttgggattataacaatgatccttttcaacaactcttacatttattaggt
ctggaagagttccctcaaaacaataaacaatcaaattccgatatggagttgttgaagaac
gaccaggagtgcgcaatttgttattcatttaatttaggacaaaaagttccagatgttgtt
tgtaaaaatgagagttgtgagaatgttttccacaatgaatgtttgtttgagtggttgatg
tctattaatgctaaaagagtttattatgagattattggatcctgtccaaattgtgaaaag
ccaatttcttgtataaatccactgaactga
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