Aethina tumida (small hive beetle): 109598121
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Entry
109598121 CDS
T06105
Name
(RefSeq) probable ATP-dependent RNA helicase DDX28
KO
K20096
ATP-dependent RNA helicase DDX28 [EC:
5.6.2.7
]
Organism
atd
Aethina tumida (small hive beetle)
Brite
KEGG Orthology (KO) [BR:
atd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
atd03009
]
109598121
Enzymes [BR:
atd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109598121
Ribosome biogenesis [BR:
atd03009
]
Eukaryotic type
Other ribosome biogenesis factors
109598121
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
SMC_N
Motif
Other DBs
NCBI-GeneID:
109598121
NCBI-ProteinID:
XP_019869520
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All DBs
Position
7:complement(join(3934499..3934597,3934653..3935539,3935602..3936055))
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AA seq
479 aa
AA seq
DB search
MSFRTLLRNKIKVQLDWNSKYSKQALNLNQSSQCVISTKREKLNHYTNTVYSKFDEVPLI
SKGWNHNKSKNDSFTVHPVGTTNEQQLHSFDEMNIHADLQNTLKQWGVNKATDLQFRAAP
TILGENHVMLAAETGCGKTLAYLLPIVQSLIGNKQTDLNKPRAVILVPNRELAYQIGELA
ISLTQSVNLKAKIVVGGRTKKLMMNPEFEDIDILVGTPGAIGKLSTVGVYKLNEARFLVL
DEADTLIDDSFIERIDSIIKRVSGSQIILVSATLPRKLPEVLAPIEQELRHVTSPNLHKP
PLNITQKFLRLTRAAKPSYLLKIVKNTSEPMLIFSNRNQTCNWIAMFLRENQVACSNING
DMNYAIRIDQWNQFVRGETRILSATDVGSRGLNTIQIRHVLNYNFPLYAADYLHRVGRVG
RIGSPVSCRVTNFISGPEEVALVRQIEYAIRRGEPLTNVDGNITNIVQNRILKNMRESM
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttcgtactttgttaaggaacaaaataaaagtccaattggactggaattctaag
tactcaaagcaagccttaaatttaaatcaatcgtcacaatgtgtcatcagtacaaaacgc
gaaaaattgaaccactataccaacacagtttactcaaaatttgatgaggttccattaata
tccaaaggttggaaccacaacaaaagtaaaaatgatagttttacggtacatccagtcggg
acaacgaacgaacaacaactccattcctttgatgaaatgaacatccatgcagatctccaa
aacacattaaaacagtggggtgtaaacaaggcaacagatctacaatttagggctgcacct
actatattgggggaaaatcatgttatgctggctgctgaaactggctgtggtaaaacgttg
gcgtatttattacccattgttcaaagtcttattggtaataaacagactgatttaaataaa
ccaagagcagtaattcttgtaccaaatcgcgagctggcatatcaaataggggaactagca
atctcgttaacacaatcagtgaacttgaaagcaaaaattgtggtgggcggacgcacgaaa
aagctaatgatgaacccggaattcgaagacatcgatattcttgtagggacccctggcgcg
atcggaaaactgagcacagtgggcgtgtacaagctgaatgaagctagattcttggtgctg
gacgaagctgacacacttatagacgacagtttcattgaacgaatcgacagtattattaaa
cgagtctcgggttcacaaatcatactggtttctgcaacgttaccgaggaagttaccggag
gttttagcaccgatcgagcaagaattgcggcacgtcacgtcgccgaatttgcacaaacca
ccccttaacatcacgcagaagtttctcagattaaccagggcggctaaacctagttatttg
ttgaagatcgtcaagaatactagcgaacccatgttgatttttagcaacagaaaccagacg
tgcaattggatagcgatgtttttgcgtgaaaaccaagttgcctgttcaaatatcaacggc
gacatgaactatgcgataagaattgatcagtggaaccaatttgttaggggcgagacgaga
atcttgtccgcgactgatgtaggctctagaggtctgaatactattcaaattcggcacgtt
ttaaactataattttcccttgtatgcggccgattatttgcatcgagtcggaagggttgga
aggataggaagtccggtttcttgtagggttactaattttatttccgggccagaagaagtt
gctctagtacgacaaattgagtatgcaattaggagaggcgaacctttaacgaacgttgat
ggaaacataacaaatatcgttcaaaacagaatacttaagaatatgagagaatcaatgtag
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